Gb_03568


Description : Choline transporter protein 1 OS=Arabidopsis thaliana (sp|q94an2|cher1_arath : 300.0)


Gene families : OG0003297 (Archaeplastida) Phylogenetic Tree(s): OG0003297_tree ,
OG_05_0028687 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0027044 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03568
Cluster HCCA: Cluster_318

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00264940 evm_27.TU.AmTr_v1... Choline transporter protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G15380 No alias Plasma-membrane choline transporter family protein 0.05 Archaeplastida
Cpa|evm.model.tig00001542.16 No alias Choline transporter protein 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre01.g021500 No alias Choline transporter protein 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_10052 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc07g063230.3.1 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e006509_P001 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e024273_P001 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!