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AT2G18860


Description : Syntaxin/t-SNARE family protein


Gene families : OG0004843 (Archaeplastida) Phylogenetic Tree(s): OG0004843_tree ,
OG_05_0003341 (LandPlants) Phylogenetic Tree(s): OG_05_0003341_tree ,
OG_06_0003140 (SeedPlants) Phylogenetic Tree(s): OG_06_0003140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G18860
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Solyc04g078130.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP Neighborhood
CC GO:0000229 cytoplasmic chromosome IEP Neighborhood
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0000987 proximal promoter sequence-specific DNA binding IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
BP GO:0001887 selenium compound metabolic process IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004779 sulfate adenylyltransferase activity IEP Neighborhood
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006569 tryptophan catabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0008361 regulation of cell size IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
CC GO:0009295 nucleoid IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009310 amine catabolic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009508 plastid chromosome IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
BP GO:0009643 photosynthetic acclimation IEP Neighborhood
BP GO:0009683 indoleacetic acid metabolic process IEP Neighborhood
BP GO:0009684 indoleacetic acid biosynthetic process IEP Neighborhood
BP GO:0009850 auxin metabolic process IEP Neighborhood
BP GO:0009851 auxin biosynthetic process IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
MF GO:0009973 adenylyl-sulfate reductase activity IEP Neighborhood
BP GO:0010115 regulation of abscisic acid biosynthetic process IEP Neighborhood
BP GO:0010150 leaf senescence IEP Neighborhood
BP GO:0010271 regulation of chlorophyll catabolic process IEP Neighborhood
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP Neighborhood
BP GO:0010565 regulation of cellular ketone metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
CC GO:0012505 endomembrane system IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0016143 S-glycoside metabolic process IEP Neighborhood
BP GO:0016144 S-glycoside biosynthetic process IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019216 regulation of lipid metabolic process IEP Neighborhood
BP GO:0019419 sulfate reduction IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0019747 regulation of isoprenoid metabolic process IEP Neighborhood
BP GO:0019757 glycosinolate metabolic process IEP Neighborhood
BP GO:0019758 glycosinolate biosynthetic process IEP Neighborhood
BP GO:0019760 glucosinolate metabolic process IEP Neighborhood
BP GO:0019761 glucosinolate biosynthetic process IEP Neighborhood
MF GO:0030276 clathrin binding IEP Neighborhood
BP GO:0031329 regulation of cellular catabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0033612 receptor serine/threonine kinase binding IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0042402 cellular biogenic amine catabolic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042435 indole-containing compound biosynthetic process IEP Neighborhood
BP GO:0042436 indole-containing compound catabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
BP GO:0043455 regulation of secondary metabolic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044435 plastid part IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
BP GO:0045827 negative regulation of isoprenoid metabolic process IEP Neighborhood
BP GO:0045833 negative regulation of lipid metabolic process IEP Neighborhood
BP GO:0046218 indolalkylamine catabolic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0046890 regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0051055 negative regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0062012 regulation of small molecule metabolic process IEP Neighborhood
BP GO:0062014 negative regulation of small molecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
MF GO:0070696 transmembrane receptor protein serine/threonine kinase binding IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP Neighborhood
BP GO:0090056 regulation of chlorophyll metabolic process IEP Neighborhood
BP GO:0090359 negative regulation of abscisic acid biosynthetic process IEP Neighborhood
BP GO:0090693 plant organ senescence IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1900055 regulation of leaf senescence IEP Neighborhood
BP GO:1900056 negative regulation of leaf senescence IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP Neighborhood
BP GO:1901404 regulation of tetrapyrrole catabolic process IEP Neighborhood
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901659 glycosyl compound biosynthetic process IEP Neighborhood
MF GO:1901981 phosphatidylinositol phosphate binding IEP Neighborhood
BP GO:1902930 regulation of alcohol biosynthetic process IEP Neighborhood
BP GO:1902931 negative regulation of alcohol biosynthetic process IEP Neighborhood
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Neighborhood
BP GO:1905622 negative regulation of leaf development IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood
BP GO:2000024 regulation of leaf development IEP Neighborhood
InterPro domains Description Start Stop
IPR015260 Syntaxin-6_N 13 97
No external refs found!