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  5. Gb_04139

Gb_04139


Description : class III/Trithorax histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0000350 (Archaeplastida) Phylogenetic Tree(s): OG0000350_tree ,
OG_05_0004122 (LandPlants) Phylogenetic Tree(s): OG_05_0004122_tree ,
OG_06_0005195 (SeedPlants) Phylogenetic Tree(s): OG_06_0005195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04139
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00081590 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
AT1G77300 LAZ2, CCR1,... histone methyltransferases(H3-K4 specific);histone... 0.03 Archaeplastida
AT5G42400 SDG25, ATXR7 SET domain protein 25 0.06 Archaeplastida
Cpa|evm.model.tig00001073.18 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
Cre09.g392542 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
GSVIVT01008805001 No alias Chromatin organisation.histone modifications.histone... 0.06 Archaeplastida
LOC_Os02g34850.1 No alias class II/ASH1 histone methyltransferase component of... 0.07 Archaeplastida
LOC_Os12g41900.1 No alias class III/Trithorax histone methyltransferase component... 0.05 Archaeplastida
MA_10436500g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_18041g0010 No alias class III/Trithorax histone methyltransferase component... 0.05 Archaeplastida
Mp1g17790.1 No alias class III/Trithorax histone methyltransferase component... 0.04 Archaeplastida
Mp8g18560.1 No alias class II/ASH1 histone methyltransferase component of... 0.11 Archaeplastida
Pp3c1_33770V3.1 No alias histone methyltransferases(H3-K4 specific);histone... 0.05 Archaeplastida
Pp3c24_20920V3.1 No alias SET domain protein 25 0.06 Archaeplastida
Pp3c2_12540V3.1 No alias histone methyltransferases(H3-K4 specific);histone... 0.05 Archaeplastida
Solyc04g057880.3.1 No alias class II/ASH1 histone methyltransferase component of... 0.02 Archaeplastida
Solyc06g059960.4.1 No alias class II/ASH1 histone methyltransferase component of... 0.03 Archaeplastida
Zm00001e014806_P003 No alias class II/ASH1 histone methyltransferase component of... 0.03 Archaeplastida
Zm00001e039307_P005 No alias class III/Trithorax histone methyltransferase component... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003169 GYF 361 397
IPR001214 SET_dom 1336 1440
No external refs found!