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  5. Gb_04505

Gb_04505


Description : histone (H3)


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0000124 (LandPlants) Phylogenetic Tree(s): OG_05_0000124_tree ,
OG_06_0000125 (SeedPlants) Phylogenetic Tree(s): OG_06_0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04505
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00240080 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cpa|evm.model.tig00021038.65 No alias Histone H3.3a OS=Lilium longiflorum 0.02 Archaeplastida
LOC_Os05g36280.1 No alias histone (H3) 0.03 Archaeplastida
LOC_Os06g06510.1 No alias histone (H3) 0.03 Archaeplastida
Solyc01g095650.4.1 No alias histone H3 variant (CENH3) 0.03 Archaeplastida
Zm00001e036599_P001 No alias histone (H3) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0007050 cell cycle arrest IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!