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  5. Gb_05036

Gb_05036


Description : Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia (sp|q94kl7|sild_forin : 243.0)


Gene families : OG0000154 (Archaeplastida) Phylogenetic Tree(s): OG0000154_tree ,
OG_05_0000088 (LandPlants) Phylogenetic Tree(s): OG_05_0000088_tree ,
OG_06_0017829 (SeedPlants) Phylogenetic Tree(s): OG_06_0017829_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_05036
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00244330 evm_27.TU.AmTr_v1... Tropinone reductase-like 1 OS=Erythroxylum coca 0.03 Archaeplastida
AMTR_s00030p00244570 evm_27.TU.AmTr_v1... Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
AT3G42960 ATA1, TA1, ASD TAPETUM 1 0.02 Archaeplastida
GSVIVT01008067001 No alias (-)-isopiperitenol/(-)-carveol dehydrogenase,... 0.03 Archaeplastida
GSVIVT01033911001 No alias Tropinone reductase-like 1 OS=Erythroxylum coca 0.02 Archaeplastida
Gb_07561 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Gb_29691 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
LOC_Os07g46860.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os07g49120.1 No alias Sex determination protein tasselseed-2 OS=Zea mays... 0.03 Archaeplastida
MA_289156g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Mp3g24690.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Solyc12g056610.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Solyc12g056710.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
Zm00001e035437_P002 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!