Heatmap: Cluster_178 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
0.84 - - - 0.24 0.57 - -0.09 -2.66 -0.57 - 0.14 - - -0.95 - - 2.14 -0.38 2.8
0.68 -3.93 -2.27 -0.56 -3.36 -2.49 - -0.62 -0.47 -0.07 -3.47 -5.47 -1.52 -1.31 -5.3 -0.02 1.27 1.05 1.05 2.68
- - - - - - - - - - 4.32 - - - - - - - - -
-1.96 - -0.99 2.3 0.69 -0.79 -1.69 -1.43 -0.09 -0.19 - - -0.2 -0.97 -0.14 2.57 -0.49 - -0.5 -
-1.92 - -21.14 -19.26 -20.0 3.95 1.42 -1.45 -2.57 -1.84 - -2.01 - -2.54 - - - - -21.96 -1.29
-0.09 -1.39 - -0.85 0.79 -1.24 -4.24 -0.79 -1.59 -1.56 -3.57 -2.47 -3.8 -3.46 -1.15 -0.76 -1.23 -1.37 0.62 3.44
0.57 - - - - - - 0.84 - - - - - 1.43 - 2.33 - - 3.17 -
- - - - - - - - - - - - - - - - - - - -
- - - 3.44 1.74 2.08 - -1.02 - - - - - - - - - - 0.13 -
- - - - - - - - - - - - - - - 4.32 - - - -
-0.05 - -2.41 -0.43 -0.63 0.1 -5.27 -0.09 -0.61 -0.89 -0.02 -1.62 -1.08 -0.35 0.23 -0.68 -2.2 -0.94 1.48 2.66
0.4 -5.3 -2.32 -0.95 -0.03 -0.35 -5.95 -0.28 -0.91 -0.8 -0.65 -1.3 -0.74 -0.19 -0.28 -0.74 -2.65 -0.57 1.1 2.87
- - - - - - - - - - - - - - - - - - - -
-0.56 1.09 0.87 0.98 1.82 2.15 -6.72 -5.54 - - - - - - - -4.42 - -1.04 1.58 0.88
- - - - - 1.14 3.04 -2.14 - -1.36 - -2.9 -1.6 - - -1.04 - - -3.19 2.98
- - - - - - - - - - - - 1.71 - - 3.8 - - 1.46 -
3.7 - - - - - - - 2.8 - - - - - - - - - - -
- - - - - - - - - - - - - - 3.22 - 3.42 - - -
-1.09 - - - - - 2.46 -0.41 1.65 1.41 -0.16 -1.0 -1.51 -0.01 - - 1.96 - - -0.21
1.44 0.67 2.06 - 1.11 - -1.39 -3.12 -2.58 - - - - - -1.52 - - 0.25 0.57 2.51
- - - - - - - - - - - - - 2.84 - - - - 3.68 -
- - - - - - - 4.32 - - - - - - - - - - - -
2.37 2.98 1.13 - 1.22 - -1.6 -1.53 - - - - - - - - - -1.09 0.32 -
- - - 3.53 - - -0.3 -0.31 -1.04 - 0.55 - - - - - 1.76 - 0.6 -
3.27 - - - - - - 1.09 - - - 1.72 - - - - - - - 2.31
- - - - - - - -1.05 - 2.19 2.96 - - - - - - 2.84 - -
- - - 3.62 - - - -1.0 - -1.99 - - - 1.52 - - - - 2.04 -
- - - - - - - 0.02 - - 4.25 - - - - - - - - -
- - - - - - - 1.4 1.47 - - - 0.62 -0.42 3.02 - - -16.5 2.06 -
- - - - - - - - - - - - - - - - - - - -
1.98 - - - - - 1.45 -0.69 1.6 - - - - 1.9 - - - - 1.51 1.61
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - 4.2 0.73
-0.86 -1.8 -3.98 - -3.82 -1.67 -4.83 -2.51 -5.52 - - -3.85 -0.88 0.49 - - -1.0 - 1.03 3.8
-1.72 - - 2.53 - - - -0.64 -0.95 -0.59 - - -1.1 -2.15 -0.95 2.8 - - 0.28 1.44
- - - - - - - 0.13 - - 0.63 - - -0.66 2.15 - 1.94 - 3.08 -
2.52 - 3.29 - - - - -0.39 - - - 0.8 - - 0.99 - - - - -
1.33 - 1.63 - - -0.32 1.03 -2.77 - - - - - - - - - - - 3.51
2.57 - - - - - - 3.67 - - - - - - - - - - 0.47 -
-0.92 - -3.14 0.31 -1.42 -1.95 -3.5 -0.58 -0.84 -1.03 -1.84 -1.88 -0.13 0.67 -0.81 -2.95 -3.68 -0.3 2.23 2.66
- - - - - - 1.94 -0.54 - - - - 1.62 - 2.56 - - - - 2.7
- - - - - - 2.26 1.74 3.53 - - - - - - - - - -1.77 -
-4.01 -7.44 -5.67 -2.99 -1.89 -6.72 -3.57 0.11 0.36 0.38 0.04 -0.71 0.42 0.66 -0.64 -2.02 1.09 -2.03 1.45 2.38
- - - - - - 1.93 -0.01 0.16 - 1.7 - - - - 3.44 - - - -
-0.09 - -0.11 1.6 - - - -0.68 - - -0.2 - -1.5 -1.5 -0.33 2.6 - - 0.94 2.05
- - - - - - - - - - - - - - - - - - - -
- - - - - - - -2.08 - 1.05 - - - - - 4.15 - - - -
- 2.19 - 3.2 - - - -1.9 -0.72 - - -1.89 -0.26 - -0.59 -1.87 -0.01 - 1.23 -
- - - - - - - - - - - - - 4.32 - - - - - -
-5.79 - - - - - - 4.3 - - - - - - - - - -2.75 - -2.32
0.91 0.21 0.55 0.68 1.0 1.02 0.47 -0.53 -1.62 -1.62 -1.72 -1.31 -1.75 -1.9 -1.68 -2.27 -1.24 -0.78 -0.97 1.93
0.23 - - 2.6 - -5.54 - -0.32 - - - - 1.42 1.23 - 1.18 - 0.17 -0.35 1.46
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - 0.56 - - - - - - - - - - 4.21 -
- - - - - - - - 1.68 - - - - - - - 4.07 - - -
2.55 - - - - - 1.37 1.57 - - 1.25 -1.09 1.08 - 1.33 -9.16 -9.54 - 0.17 -
-0.21 - - 2.22 - - - -0.66 - - - -1.65 0.32 0.3 - 0.66 1.87 - 1.53 1.54
- - - - - - - -1.77 0.78 - - - - - - 4.17 - - - -
-2.8 - - - - -3.64 -3.69 -8.1 - - - - - - - - - -0.68 2.93 3.51
- - - 3.3 - - 2.74 -0.54 - - 1.49 - - - - - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - 2.78 - - - 0.56 0.6 - 0.99 - - 1.2 0.78 0.39 - - 1.49 -
-3.94 - - - - - -3.43 -5.95 -5.2 -4.57 - -4.42 - -6.28 -4.84 - -5.73 - -1.21 4.26
- - - - - - - - - - - - - - - - - - - -
- - -0.39 3.61 0.09 - - -3.3 -26.0 - - - -1.27 -1.24 -0.96 -2.85 - - 2.12 -
- - - - - - - 0.27 - - - - - - 4.23 - - - - -
-0.3 - -0.9 0.44 0.51 - 2.49 0.13 -3.58 -2.71 -1.85 - 0.66 1.16 0.08 -1.52 -1.48 -0.03 0.89 -2.16
0.07 1.56 0.47 -0.37 1.74 -6.32 2.76 -7.62 -7.23 -7.47 - -2.47 -7.99 - - - - - 0.36 1.15
- - - 4.29 - - - -1.3 - - - - - - - - - - - -
- - - - - - - 1.18 0.52 3.39 - - 1.03 1.91 - - - - - -
1.34 -1.82 -0.76 - -1.27 -3.78 - -2.38 -1.47 -3.16 -1.41 -2.5 -3.07 -3.75 -1.49 - -3.79 2.38 1.91 2.41
- - - - - - - 0.64 - - - - - - - 4.2 - - - -
1.83 -2.45 -0.63 -1.59 -0.55 -1.76 -3.4 -0.51 -0.44 -0.53 -0.99 -1.28 -0.98 -0.88 -1.42 -2.28 -2.57 0.84 1.53 2.23
-0.08 - 1.14 1.89 -2.66 -1.62 -0.51 -0.43 -1.08 -2.63 0.59 -3.62 -2.04 -0.83 0.33 -0.53 -0.41 -1.36 1.88 0.5
0.03 - -4.2 - -2.92 -4.54 -5.07 -2.3 -4.92 -4.69 -4.9 -2.64 -2.66 -3.65 - - - -3.65 -7.36 4.16
-0.12 - - - - 1.21 - 0.04 1.55 1.62 - -0.91 - -0.52 - - - 2.41 - 1.68
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - 2.83 3.69 - - - - - - - - - -
- - - 4.04 - - - -0.04 - - 1.35 - - - - - - - - -
- - - - - - 2.55 -0.96 - - 2.18 - - - - - - - - 3.19
0.77 - - - - 0.13 -0.9 1.07 -0.36 -1.09 - 0.43 0.03 -0.71 - 0.43 0.23 1.24 2.03 0.46
- - - 2.61 1.66 1.47 - -0.81 - - - - - - - -4.54 - - 2.1 1.61
- - - - - - 2.01 -0.34 - - - 0.94 - - - 3.44 - - 1.27 -
- - - - - - - 4.32 - - - - - - - - - - - -
- 2.23 - - - - - 1.24 - - 0.97 - - -0.4 0.84 1.76 1.56 - 1.08 -
- - 1.76 2.94 - - - -1.23 - - - - - - - 1.39 - - 2.55 -
- - 1.12 2.83 2.13 - - -1.41 -0.41 0.27 - - - - - - - - 0.97 1.04
- - - - - - - - - - - - - - - - - - - 4.32
-0.84 -3.41 -0.61 1.32 - 0.15 0.62 0.73 -0.64 0.05 -2.27 -5.39 0.85 1.06 0.16 0.0 0.13 -2.77 1.18 -1.06
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - -0.87 2.97 -5.09 - - - - - - - - - - - 3.53
0.58 - 1.84 - - - - 0.85 0.25 -0.15 2.23 - - -0.84 - - - - 1.63 1.43
- - - - - - - 0.78 - - - - - - - - - - 4.19 -
-0.92 - -3.14 0.31 -1.42 -1.95 -3.5 -0.58 -0.84 -1.03 -1.84 -1.88 -0.13 0.67 -0.81 -2.95 -3.68 -0.3 2.23 2.66
0.32 0.12 1.25 -1.93 0.24 - 2.04 - - - - - - - - - - -4.68 - 3.28
- - - - - - - - - - - - - - - - - 4.32 - -
-1.96 - -1.95 - - -0.49 1.42 -2.87 -3.99 -2.24 - - - - - -1.4 - - -0.24 3.85
- - - - - - - -0.18 0.07 0.67 - - 0.45 -1.09 1.25 - - - 3.48 0.14
0.36 - - 2.04 -0.5 - -0.43 -0.11 0.04 1.14 -0.7 - -1.05 -0.16 - 1.74 - -0.83 1.04 0.05
0.67 - - - - - - -0.24 - - - - 0.47 - - 3.34 - - 1.65 1.55
-0.11 - - -0.02 -2.08 -3.91 0.4 -2.39 - - - -3.59 - - - - - -0.99 0.07 3.87
- - - - - - - - - - - - - - - 4.32 - - - -
- - - - - - - - - - - - - - - - - - - 4.32
- - 2.35 - - - - -1.8 - - - - - 0.95 - - 3.67 - - -
- - - - - - - 0.23 0.9 - - -0.39 0.21 - - - - - 3.29 2.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.