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  5. Gb_06182

Gb_06182


Description : transcription factor (bHLH)


Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0053797 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06182
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT5G01305 No alias No description available 0.03 Archaeplastida
GSVIVT01022111001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
MA_88831g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp3g17350.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
Pp3c10_19020V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c14_16620V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c1_40040V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 166 207
No external refs found!