Description : Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana (sp|q67xl4|y3544_arath : 179.0)
Gene families : OG0001381 (Archaeplastida) Phylogenetic Tree(s): OG0001381_tree ,
OG_05_0000914 (LandPlants) Phylogenetic Tree(s): OG_05_0000914_tree ,
OG_06_0003015 (SeedPlants) Phylogenetic Tree(s): OG_06_0003015_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_06284 | |
Cluster | HCCA: Cluster_287 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00061p00073040 | evm_27.TU.AmTr_v1... | Uncharacterized CRM domain-containing protein At3g25440,... | 0.02 | Archaeplastida | |
GSVIVT01032387001 | No alias | Uncharacterized CRM domain-containing protein At3g25440,... | 0.03 | Archaeplastida | |
Zm00001e027517_P001 | No alias | Uncharacterized CRM domain-containing protein At3g25440,... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Neighborhood |
CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Neighborhood |
BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Neighborhood |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
MF | GO:0004402 | histone acetyltransferase activity | IEP | Neighborhood |
CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
CC | GO:0005666 | RNA polymerase III complex | IEP | Neighborhood |
BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
BP | GO:0006383 | transcription by RNA polymerase III | IEP | Neighborhood |
BP | GO:0006405 | RNA export from nucleus | IEP | Neighborhood |
BP | GO:0006406 | mRNA export from nucleus | IEP | Neighborhood |
BP | GO:0006473 | protein acetylation | IEP | Neighborhood |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | Neighborhood |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
MF | GO:0008080 | N-acetyltransferase activity | IEP | Neighborhood |
BP | GO:0009451 | RNA modification | IEP | Neighborhood |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Neighborhood |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
MF | GO:0016407 | acetyltransferase activity | IEP | Neighborhood |
MF | GO:0016410 | N-acyltransferase activity | IEP | Neighborhood |
BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
BP | GO:0016570 | histone modification | IEP | Neighborhood |
BP | GO:0016573 | histone acetylation | IEP | Neighborhood |
MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
MF | GO:0016866 | intramolecular transferase activity | IEP | Neighborhood |
BP | GO:0016973 | poly(A)+ mRNA export from nucleus | IEP | Neighborhood |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
BP | GO:0018208 | peptidyl-proline modification | IEP | Neighborhood |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Neighborhood |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
CC | GO:0030880 | RNA polymerase complex | IEP | Neighborhood |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
BP | GO:0043543 | protein acylation | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
BP | GO:0050657 | nucleic acid transport | IEP | Neighborhood |
BP | GO:0050658 | RNA transport | IEP | Neighborhood |
BP | GO:0051028 | mRNA transport | IEP | Neighborhood |
BP | GO:0051168 | nuclear export | IEP | Neighborhood |
BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
BP | GO:0051236 | establishment of RNA localization | IEP | Neighborhood |
MF | GO:0051499 | D-aminoacyl-tRNA deacylase activity | IEP | Neighborhood |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Neighborhood |
CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Neighborhood |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Neighborhood |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
CC | GO:1990234 | transferase complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001890 | RNA-binding_CRM | 128 | 212 |
No external refs found! |