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  5. Gb_06422

Gb_06422


Description : ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana (sp|d1kf50|srs2l_arath : 342.0)


Gene families : OG0001612 (Archaeplastida) Phylogenetic Tree(s): OG0001612_tree ,
OG_05_0004596 (LandPlants) Phylogenetic Tree(s): OG_05_0004596_tree ,
OG_06_0005341 (SeedPlants) Phylogenetic Tree(s): OG_06_0005341_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06422
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00193850 evm_27.TU.AmTr_v1... ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.03 Archaeplastida
GSVIVT01013853001 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.03 Archaeplastida
MA_10437065g0010 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.03 Archaeplastida
MA_44585g0010 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.02 Archaeplastida
Mp7g19290.1 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.03 Archaeplastida
Zm00001e010432_P001 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006547 histidine metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0052803 imidazole-containing compound metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR014017 DNA_helicase_UvrD-like_C 15 95
No external refs found!