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  5. Gb_06648

Gb_06648


Description : Myosin-17 OS=Arabidopsis thaliana (sp|f4k5j1|myo17_arath : 1869.0)


Gene families : OG0000144 (Archaeplastida) Phylogenetic Tree(s): OG0000144_tree ,
OG_05_0061558 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0054874 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06648
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AT5G54280 ATMYOS1, ATM4, ATM2 myosin 2 0.03 Archaeplastida
Cpa|evm.model.tig00020614.58 No alias Myosin-8 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00020951.43 No alias Myosin-10 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01014437001 No alias Cytoskeleton.microfilament network.myosin... 0.06 Archaeplastida
GSVIVT01016822001 No alias Cytoskeleton.microfilament network.myosin... 0.03 Archaeplastida
GSVIVT01028290001 No alias Cytoskeleton.microfilament network.myosin... 0.03 Archaeplastida
Gb_03454 No alias class VIII myosin microfilament-based motor protein 0.06 Archaeplastida
Gb_06922 No alias Myosin-1 OS=Arabidopsis thaliana (sp|q9lhe9|myo1_arath : 187.0) 0.04 Archaeplastida
LOC_Os01g51632.1 No alias Myosin-17 OS=Arabidopsis thaliana (sp|f4k5j1|myo17_arath : 422.0) 0.02 Archaeplastida
LOC_Os03g64290.1 No alias class XI myosin microfilament-based motor protein 0.03 Archaeplastida
LOC_Os06g29350.1 No alias class XI myosin microfilament-based motor protein 0.02 Archaeplastida
LOC_Os07g37560.1 No alias class VIII myosin microfilament-based motor protein 0.04 Archaeplastida
LOC_Os10g19860.1 No alias class XI myosin microfilament-based motor protein 0.02 Archaeplastida
LOC_Os10g34710.1 No alias class VIII myosin microfilament-based motor protein 0.03 Archaeplastida
Mp8g04010.1 No alias C3H zinc finger transcription factor. class XI myosin... 0.03 Archaeplastida
Pp3c15_13490V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Pp3c18_1430V3.1 No alias myosin 1 0.02 Archaeplastida
Solyc06g083960.3.1 No alias class XI myosin microfilament-based motor protein 0.03 Archaeplastida
Solyc07g041150.4.1 No alias class XI myosin microfilament-based motor protein 0.03 Archaeplastida
Solyc09g091080.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e006446_P002 No alias class XI myosin microfilament-based motor protein 0.02 Archaeplastida
Zm00001e012626_P001 No alias class VIII myosin microfilament-based motor protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006476 protein deacetylation IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016575 histone deacetylation IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0030688 preribosome, small subunit precursor IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0035601 protein deacylation IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0098732 macromolecule deacylation IEP Neighborhood
InterPro domains Description Start Stop
IPR004009 Myosin_N 404 440
IPR000048 IQ_motif_EF-hand-BS 1279 1296
IPR000048 IQ_motif_EF-hand-BS 1252 1272
IPR000048 IQ_motif_EF-hand-BS 1230 1248
IPR000048 IQ_motif_EF-hand-BS 1403 1422
IPR002710 Dilute_dom 1923 2048
IPR001609 Myosin_head_motor_dom 458 838
IPR001609 Myosin_head_motor_dom 903 936
IPR001609 Myosin_head_motor_dom 1004 1213
No external refs found!