Gb_06864

Description : transcription factor (GATA)

Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0000055 (LandPlants) Phylogenetic Tree(s): OG_05_0000055_tree ,
OG_06_0000244 (SeedPlants) Phylogenetic Tree(s): OG_06_0000244_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_06864
Cluster	HCCA: Cluster_263

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00254680	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00011p00253850	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AT3G45170	GATA14	GATA transcription factor 14	0.02	Archaeplastida
AT5G26930	GATA23	GATA transcription factor 23	0.03	Archaeplastida
GSVIVT01035614001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
LOC_Os02g56250.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os03g05160.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os05g44400.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os10g40810.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os12g42970.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
MA_103421g0030	No alias	transcription factor (GATA)	0.02	Archaeplastida
MA_10436047g0010	No alias	transcription factor (GATA)	0.03	Archaeplastida
Mp1g03950.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
Pp3c10_22480V3.1	No alias	GATA transcription factor 9	0.02	Archaeplastida
Pp3c10_22600V3.1	No alias	GATA transcription factor 5	0.04	Archaeplastida
Solyc01g110310.3.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
Solyc02g084590.4.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
Solyc03g120890.3.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
Solyc09g075610.3.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
Zm00001e016165_P001	No alias	transcription factor (GATA)	0.03	Archaeplastida
Zm00001e032219_P001	No alias	transcription factor (GATA)	0.02	Archaeplastida
Zm00001e032513_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity	IEP	Neighborhood
MF	GO:0003993	acid phosphatase activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0008483	transaminase activity	IEP	Neighborhood
MF	GO:0008509	anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015098	molybdate ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015689	molybdate ion transport	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Neighborhood
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016791	phosphatase activity	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	235	268

External Links

No external refs found!

Gb_06864

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation