- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 582.0)
Gene families : OG0000874 (Archaeplastida) Phylogenetic Tree(s): OG0000874_tree ,
OG_05_0000126 (LandPlants) Phylogenetic Tree(s): OG_05_0000126_tree ,
OG_06_0000049 (SeedPlants) Phylogenetic Tree(s): OG_06_0000049_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_06979 | |
| Cluster | HCCA: Cluster_51 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_00103 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.08 | Archaeplastida | |
| Gb_01356 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | Archaeplastida | |
| Gb_01470 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.15 | Archaeplastida | |
| Gb_01791 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
| Gb_02742 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.08 | Archaeplastida | |
| Gb_03910 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.13 | Archaeplastida | |
| Gb_07329 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.11 | Archaeplastida | |
| Gb_08736 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.11 | Archaeplastida | |
| Gb_08813 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.1 | Archaeplastida | |
| Gb_10984 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | Archaeplastida | |
| Gb_13579 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.09 | Archaeplastida | |
| Gb_13962 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | Archaeplastida | |
| Gb_14528 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.08 | Archaeplastida | |
| Gb_15173 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.12 | Archaeplastida | |
| Gb_17516 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.11 | Archaeplastida | |
| Gb_17834 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.13 | Archaeplastida | |
| Gb_18467 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.14 | Archaeplastida | |
| Gb_20680 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
| Gb_24463 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.14 | Archaeplastida | |
| Gb_24932 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.38 | Archaeplastida | |
| Gb_25674 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.21 | Archaeplastida | |
| Gb_26729 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.11 | Archaeplastida | |
| Gb_27577 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.19 | Archaeplastida | |
| Gb_27820 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.12 | Archaeplastida | |
| Gb_29931 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.38 | Archaeplastida | |
| Gb_30240 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
| Gb_32311 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.09 | Archaeplastida | |
| Gb_33326 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.08 | Archaeplastida | |
| Gb_33563 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.1 | Archaeplastida | |
| Gb_33581 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.29 | Archaeplastida | |
| Gb_34206 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.11 | Archaeplastida | |
| Gb_34518 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.13 | Archaeplastida | |
| Gb_34670 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.17 | Archaeplastida | |
| Gb_35549 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
| Gb_37844 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.16 | Archaeplastida | |
| Gb_38553 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0015074 | DNA integration | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |