Description : RNA editing factor (ORRM)
Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0003873 (LandPlants) Phylogenetic Tree(s): OG_05_0003873_tree ,
OG_06_0002371 (SeedPlants) Phylogenetic Tree(s): OG_06_0002371_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_07052 | |
Cluster | HCCA: Cluster_209 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G23830 | GR-RBP4, GRP4 | glycine-rich RNA-binding protein 4 | 0.02 | Archaeplastida | |
AT4G13850 | GRP2, ATGRP2, GR-RBP2 | glycine-rich RNA-binding protein 2 | 0.04 | Archaeplastida | |
Cpa|evm.model.tig00000944.16 | No alias | RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana | 0.01 | Archaeplastida | |
GSVIVT01017884001 | No alias | No description available | 0.06 | Archaeplastida | |
MA_10428777g0010 | No alias | Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba... | 0.04 | Archaeplastida | |
Mp3g06220.1 | No alias | 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia... | 0.02 | Archaeplastida | |
Pp3c1_6280V3.1 | No alias | glycine-rich RNA-binding protein 3 | 0.02 | Archaeplastida | |
Smo140819 | No alias | RNA processing.organelle machineries.RNA... | 0.02 | Archaeplastida | |
Solyc01g104840.4.1 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.05 | Archaeplastida | |
Solyc05g053780.4.1 | No alias | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.05 | Archaeplastida | |
Zm00001e008185_P001 | No alias | Small RNA-binding protein 11, chloroplastic... | 0.04 | Archaeplastida | |
Zm00001e018490_P002 | No alias | Glycine-rich RNA-binding protein 2, mitochondrial... | 0.03 | Archaeplastida | |
Zm00001e039608_P001 | No alias | RNA editing factor (ORRM) | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | Neighborhood |
MF | GO:0031072 | heat shock protein binding | IEP | Neighborhood |
CC | GO:0032993 | protein-DNA complex | IEP | Neighborhood |
CC | GO:0044427 | chromosomal part | IEP | Neighborhood |
CC | GO:0044815 | DNA packaging complex | IEP | Neighborhood |
MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 46 | 112 |
No external refs found! |