AT2G23170 (GH3.3)

Aliases : GH3.3

Description : Auxin-responsive GH3 family protein

Gene families : OG0000138 (Archaeplastida) Phylogenetic Tree(s): OG0000138_tree ,
OG_05_0000189 (LandPlants) Phylogenetic Tree(s): OG_05_0000189_tree ,
OG_06_0000290 (SeedPlants) Phylogenetic Tree(s): OG_06_0000290_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G23170
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00258580	evm_27.TU.AmTr_v1...	Indole-3-acetic acid-amido synthetase GH3.10...	0.03	Archaeplastida
AMTR_s00043p00208540	evm_27.TU.AmTr_v1...	Phytohormones.auxin.conjugation and...	0.05	Archaeplastida
AMTR_s00045p00199760	evm_27.TU.AmTr_v1...	Putative indole-3-acetic acid-amido synthetase GH3.9...	0.03	Archaeplastida
AT1G23160	No alias	Auxin-responsive GH3 family protein	0.06	Archaeplastida
AT1G28130	GH3.17	Auxin-responsive GH3 family protein	0.08	Archaeplastida
AT1G48690	No alias	Auxin-responsive GH3 family protein	0.03	Archaeplastida
AT5G13380	No alias	Auxin-responsive GH3 family protein	0.06	Archaeplastida
AT5G51470	No alias	Auxin-responsive GH3 family protein	0.07	Archaeplastida
GSVIVT01027971001	No alias	Putative indole-3-acetic acid-amido synthetase GH3.9...	0.03	Archaeplastida
Gb_00287	No alias	Indole-3-acetic acid-amido synthetase GH3.6...	0.02	Archaeplastida
Gb_04369	No alias	indole-3-acetic acid-amido synthetase	0.03	Archaeplastida
Gb_06148	No alias	Indole-3-acetic acid-amido synthetase GH3.17...	0.06	Archaeplastida
Gb_09255	No alias	Indole-3-acetic acid-amido synthetase GH3.5...	0.02	Archaeplastida
Gb_31649	No alias	Indole-3-acetic acid-amido synthetase GH3.5...	0.03	Archaeplastida
Gb_36596	No alias	Indole-3-acetic acid-amido synthetase GH3.17...	0.04	Archaeplastida
Gb_41415	No alias	indole-3-acetic acid-amido synthetase	0.02	Archaeplastida
LOC_Os01g55940.1	No alias	indole-3-acetic acid-amido synthetase	0.04	Archaeplastida
LOC_Os01g57610.1	No alias	indole-3-acetic acid-amido synthetase	0.02	Archaeplastida
LOC_Os05g42150.1	No alias	indole-3-acetic acid-amido synthetase	0.02	Archaeplastida
LOC_Os11g08340.1	No alias	Probable indole-3-acetic acid-amido synthetase GH3.12...	0.04	Archaeplastida
LOC_Os11g32510.1	No alias	Indole-3-acetic acid-amido synthetase GH3.17...	0.07	Archaeplastida
LOC_Os11g32520.1	No alias	Probable indole-3-acetic acid-amido synthetase GH3.13...	0.04	Archaeplastida
MA_10330250g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10432413g0020	No alias	Indole-3-acetic acid-amido synthetase GH3.6...	0.05	Archaeplastida
MA_10434772g0010	No alias	indole-3-acetic acid-amido synthetase	0.06	Archaeplastida
MA_212507g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_393345g0010	No alias	Probable indole-3-acetic acid-amido synthetase GH3.1...	0.03	Archaeplastida
MA_66253g0010	No alias	Indole-3-acetic acid-amido synthetase GH3.6...	0.02	Archaeplastida
Mp6g07600.1	No alias	Probable indole-3-acetic acid-amido synthetase GH3.8...	0.03	Archaeplastida
Pp3c24_16260V3.1	No alias	Auxin-responsive GH3 family protein	0.02	Archaeplastida
Smo110439	No alias	Indole-3-acetic acid-amido synthetase GH3.10...	0.04	Archaeplastida
Smo125443	No alias	Indole-3-acetic acid-amido synthetase GH3.10...	0.04	Archaeplastida
Smo432454	No alias	Indole-3-acetic acid-amido synthetase GH3.10...	0.02	Archaeplastida
Solyc02g064830.4.1	No alias	indole-3-acetic acid-amido synthetase	0.07	Archaeplastida
Solyc02g092820.4.1	No alias	indole-3-acetic acid-amido synthetase	0.04	Archaeplastida
Solyc07g054580.3.1	No alias	Indole-3-acetic acid-amido synthetase GH3.10...	0.02	Archaeplastida
Zm00001e002049_P001	No alias	Probable indole-3-acetic acid-amido synthetase GH3.8...	0.04	Archaeplastida
Zm00001e010686_P001	No alias	indole-3-acetic acid-amido synthetase	0.03	Archaeplastida
Zm00001e011159_P002	No alias	Indole-3-acetic acid-amido synthetase GH3.17...	0.03	Archaeplastida
Zm00001e016438_P001	No alias	jasmonoyl-amino acid synthetase (JAR1)	0.05	Archaeplastida
Zm00001e016439_P001	No alias	No annotation	0.03	Archaeplastida
Zm00001e027893_P002	No alias	jasmonoyl-amino acid synthetase (JAR1)	0.03	Archaeplastida
Zm00001e035444_P002	No alias	indole-3-acetic acid-amido synthetase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	ISS	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010252	auxin homeostasis	TAS	Interproscan
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IDA	Interproscan
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0016881	acid-amino acid ligase activity	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Neighborhood
BP	GO:0001666	response to hypoxia	IEP	Neighborhood
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004022	alcohol dehydrogenase (NAD) activity	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0007389	pattern specification process	IEP	Neighborhood
BP	GO:0009061	anaerobic respiration	IEP	Neighborhood
BP	GO:0009403	toxin biosynthetic process	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
BP	GO:0009638	phototropism	IEP	Neighborhood
BP	GO:0009641	shade avoidance	IEP	Neighborhood
BP	GO:0009700	indole phytoalexin biosynthetic process	IEP	Neighborhood
BP	GO:0009741	response to brassinosteroid	IEP	Neighborhood
BP	GO:0009799	specification of symmetry	IEP	Neighborhood
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEP	Neighborhood
BP	GO:0009823	cytokinin catabolic process	IEP	Neighborhood
BP	GO:0009830	cell wall modification involved in abscission	IEP	Neighborhood
BP	GO:0009855	determination of bilateral symmetry	IEP	Neighborhood
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009870	defense response signaling pathway, resistance gene-dependent	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	Neighborhood
BP	GO:0010014	meristem initiation	IEP	Neighborhood
BP	GO:0010015	root morphogenesis	IEP	Neighborhood
BP	GO:0010022	meristem determinacy	IEP	Neighborhood
BP	GO:0010065	primary meristem tissue development	IEP	Neighborhood
BP	GO:0010067	procambium histogenesis	IEP	Neighborhood
BP	GO:0010075	regulation of meristem growth	IEP	Neighborhood
BP	GO:0010087	phloem or xylem histogenesis	IEP	Neighborhood
BP	GO:0010089	xylem development	IEP	Neighborhood
BP	GO:0010101	post-embryonic root morphogenesis	IEP	Neighborhood
BP	GO:0010102	lateral root morphogenesis	IEP	Neighborhood
BP	GO:0010120	camalexin biosynthetic process	IEP	Neighborhood
BP	GO:0010218	response to far red light	IEP	Neighborhood
MF	GO:0010297	heteropolysaccharide binding	IEP	Neighborhood
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	Neighborhood
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	Neighborhood
BP	GO:0010432	bract development	IEP	Neighborhood
MF	GO:0010436	carotenoid dioxygenase activity	IEP	Neighborhood
BP	GO:0010451	floral meristem growth	IEP	Neighborhood
MF	GO:0010487	thermospermine synthase activity	IEP	Neighborhood
BP	GO:0010582	floral meristem determinacy	IEP	Neighborhood
BP	GO:0010583	response to cyclopentenone	IEP	Neighborhood
BP	GO:0014070	response to organic cyclic compound	IEP	Neighborhood
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Neighborhood
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Neighborhood
MF	GO:0016768	spermine synthase activity	IEP	Neighborhood
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
MF	GO:0019825	oxygen binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0032501	multicellular organismal process	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
BP	GO:0033993	response to lipid	IEP	Neighborhood
BP	GO:0034059	response to anoxia	IEP	Neighborhood
BP	GO:0035266	meristem growth	IEP	Neighborhood
BP	GO:0036293	response to decreased oxygen levels	IEP	Neighborhood
BP	GO:0040008	regulation of growth	IEP	Neighborhood
BP	GO:0042447	hormone catabolic process	IEP	Neighborhood
BP	GO:0042762	regulation of sulfur metabolic process	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044277	cell wall disassembly	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
BP	GO:0045333	cellular respiration	IEP	Neighborhood
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	IEP	Neighborhood
BP	GO:0046217	indole phytoalexin metabolic process	IEP	Neighborhood
BP	GO:0048364	root development	IEP	Neighborhood
BP	GO:0048469	cell maturation	IEP	Neighborhood
BP	GO:0048507	meristem development	IEP	Neighborhood
BP	GO:0048508	embryonic meristem development	IEP	Neighborhood
BP	GO:0048509	regulation of meristem development	IEP	Neighborhood
BP	GO:0048527	lateral root development	IEP	Neighborhood
BP	GO:0048528	post-embryonic root development	IEP	Neighborhood
BP	GO:0048638	regulation of developmental growth	IEP	Neighborhood
BP	GO:0048759	xylem vessel member cell differentiation	IEP	Neighborhood
BP	GO:0048764	trichoblast maturation	IEP	Neighborhood
BP	GO:0048765	root hair cell differentiation	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051176	positive regulation of sulfur metabolic process	IEP	Neighborhood
BP	GO:0051193	regulation of cofactor metabolic process	IEP	Neighborhood
MF	GO:0051213	dioxygenase activity	IEP	Neighborhood
MF	GO:0051749	indole acetic acid carboxyl methyltransferase activity	IEP	Neighborhood
BP	GO:0052314	phytoalexin metabolic process	IEP	Neighborhood
BP	GO:0052315	phytoalexin biosynthetic process	IEP	Neighborhood
BP	GO:0052317	camalexin metabolic process	IEP	Neighborhood
BP	GO:0052318	regulation of phytoalexin metabolic process	IEP	Neighborhood
BP	GO:0052319	regulation of phytoalexin biosynthetic process	IEP	Neighborhood
BP	GO:0052320	positive regulation of phytoalexin metabolic process	IEP	Neighborhood
BP	GO:0052322	positive regulation of phytoalexin biosynthetic process	IEP	Neighborhood
BP	GO:0065001	specification of axis polarity	IEP	Neighborhood
BP	GO:0070482	response to oxygen levels	IEP	Neighborhood
BP	GO:0070542	response to fatty acid	IEP	Neighborhood
BP	GO:0071398	cellular response to fatty acid	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071731	response to nitric oxide	IEP	Neighborhood
BP	GO:0071732	cellular response to nitric oxide	IEP	Neighborhood
BP	GO:0080086	stamen filament development	IEP	Neighborhood
BP	GO:0090506	axillary shoot meristem initiation	IEP	Neighborhood
BP	GO:0090696	post-embryonic plant organ development	IEP	Neighborhood
BP	GO:0097366	response to bronchodilator	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:1900378	positive regulation of secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:1901182	regulation of camalexin biosynthetic process	IEP	Neighborhood
BP	GO:1901183	positive regulation of camalexin biosynthetic process	IEP	Neighborhood
BP	GO:1905177	tracheary element differentiation	IEP	Neighborhood
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004993	GH3	26	565

External Links

No external refs found!

AT2G23170 (GH3.3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation