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  5. Gb_08874

Gb_08874


Description : component RPL22 of LSU proteome component


Gene families : OG0002238 (Archaeplastida) Phylogenetic Tree(s): OG0002238_tree ,
OG_05_0002172 (LandPlants) Phylogenetic Tree(s): OG_05_0002172_tree ,
OG_06_0002838 (SeedPlants) Phylogenetic Tree(s): OG_06_0002838_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08874
Cluster HCCA: Cluster_323

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00189250 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
AT3G05560 No alias Ribosomal L22e protein family 0.21 Archaeplastida
AT5G27770 No alias Ribosomal L22e protein family 0.19 Archaeplastida
Cpa|evm.model.tig00001206.7 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 Archaeplastida
Cre07.g357850 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.27 Archaeplastida
GSVIVT01028021001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
GSVIVT01031130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
GSVIVT01031158001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 Archaeplastida
GSVIVT01035141001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
LOC_Os03g22340.1 No alias component RPL22 of LSU proteome component 0.21 Archaeplastida
LOC_Os07g47710.1 No alias component RPL22 of LSU proteome component 0.16 Archaeplastida
MA_130453g0010 No alias component RPL22 of LSU proteome component 0.15 Archaeplastida
Mp4g02920.1 No alias component RPL22 of LSU proteome component 0.22 Archaeplastida
Pp3c11_630V3.1 No alias Ribosomal L22e protein family 0.18 Archaeplastida
Pp3c11_680V3.1 No alias Ribosomal L22e protein family 0.05 Archaeplastida
Pp3c16_17710V3.1 No alias Ribosomal L22e protein family 0.03 Archaeplastida
Pp3c1_120V3.1 No alias Ribosomal L22e protein family 0.21 Archaeplastida
Pp3c2_28500V3.1 No alias Ribosomal L22e protein family 0.23 Archaeplastida
Pp3c2_28510V3.1 No alias Ribosomal L22e protein family 0.23 Archaeplastida
Pp3c6_5370V3.1 No alias Ribosomal L22e protein family 0.06 Archaeplastida
Pp3c7_27030V3.1 No alias Ribosomal L22e protein family 0.14 Archaeplastida
Smo270704 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
Solyc01g099830.3.1 No alias component RPL22 of LSU proteome component 0.22 Archaeplastida
Solyc09g075150.3.1 No alias component RPL22 of LSU proteome component 0.06 Archaeplastida
Solyc09g075155.1.1 No alias component RPL22 of LSU proteome component 0.11 Archaeplastida
Zm00001e010958_P001 No alias component RPL22 of LSU proteome component 0.09 Archaeplastida
Zm00001e035835_P001 No alias component RPL22 of LSU proteome component 0.17 Archaeplastida
Zm00001e038221_P001 No alias component RPL22 of LSU proteome component 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0047750 cholestenol delta-isomerase activity IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 18 81
IPR002671 Ribosomal_L22e 181 227
No external refs found!