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  5. AT2G23630

AT2G23630 (sks16)


Aliases : sks16

Description : SKU5 similar 16


Gene families : OG0000677 (Archaeplastida) Phylogenetic Tree(s): OG0000677_tree ,
OG_05_0000383 (LandPlants) Phylogenetic Tree(s): OG_05_0000383_tree ,
OG_06_0019885 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G23630
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00159p00040990 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 Archaeplastida
AT1G75790 sks18 SKU5 similar 18 0.04 Archaeplastida
AT1G76160 sks5 SKU5 similar 5 0.04 Archaeplastida
AT4G28090 sks10 SKU5 similar 10 0.04 Archaeplastida
AT5G66920 sks17 SKU5 similar 17 0.06 Archaeplastida
GSVIVT01005054001 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum 0.03 Archaeplastida
LOC_Os06g46500.1 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.03 Archaeplastida
LOC_Os07g32660.1 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.04 Archaeplastida
MA_10236360g0010 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.04 Archaeplastida
Smo403803 No alias L-ascorbate oxidase homolog OS=Brassica napus 0.05 Archaeplastida
Solyc02g065170.3.1 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.05 Archaeplastida
Solyc02g090360.3.1 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 Archaeplastida
Solyc04g081520.3.1 No alias Monocopper oxidase-like protein SKS1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc04g082140.3.1 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.02 Archaeplastida
Solyc07g052230.3.1 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 Archaeplastida
Zm00001e012961_P001 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 Archaeplastida
Zm00001e027313_P002 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 Archaeplastida
Zm00001e028870_P001 No alias L-ascorbate oxidase homolog OS=Brassica napus... 0.03 Archaeplastida
Zm00001e031971_P001 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 Archaeplastida
Zm00001e035081_P001 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 Archaeplastida
Zm00001e041488_P001 No alias L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0010227 floral organ abscission IEP Interproscan
MF GO:0030599 pectinesterase activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0004311 farnesyltranstransferase activity IEP Neighborhood
MF GO:0004372 glycine hydroxymethyltransferase activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
BP GO:0007043 cell-cell junction assembly IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008422 beta-glucosidase activity IEP Neighborhood
BP GO:0009785 blue light signaling pathway IEP Neighborhood
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
BP GO:0010453 regulation of cell fate commitment IEP Neighborhood
BP GO:0010455 positive regulation of cell fate commitment IEP Neighborhood
MF GO:0015926 glucosidase activity IEP Neighborhood
BP GO:0016094 polyprenol biosynthetic process IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019137 thioglucosidase activity IEP Neighborhood
BP GO:0019348 dolichol metabolic process IEP Neighborhood
BP GO:0019408 dolichol biosynthetic process IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0030522 intracellular receptor signaling pathway IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
BP GO:0034329 cell junction assembly IEP Neighborhood
BP GO:0034330 cell junction organization IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0044426 cell wall part IEP Neighborhood
CC GO:0044462 external encapsulating structure part IEP Neighborhood
BP GO:0045165 cell fate commitment IEP Neighborhood
BP GO:0045216 cell-cell junction organization IEP Neighborhood
MF GO:0045547 dehydrodolichyl diphosphate synthase activity IEP Neighborhood
BP GO:0045597 positive regulation of cell differentiation IEP Neighborhood
CC GO:0048226 Casparian strip IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0048766 root hair initiation IEP Neighborhood
BP GO:0048829 root cap development IEP Neighborhood
MF GO:1990135 flavonoid sulfotransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 162 297
IPR011707 Cu-oxidase_3 36 149
IPR011706 Cu-oxidase_2 389 517
No external refs found!