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Gb_09048


Description : LWD circadian clock activation factor


Gene families : OG0001679 (Archaeplastida) Phylogenetic Tree(s): OG0001679_tree ,
OG_05_0001586 (LandPlants) Phylogenetic Tree(s): OG_05_0001586_tree ,
OG_06_0001588 (SeedPlants) Phylogenetic Tree(s): OG_06_0001588_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09048
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01038651001 No alias Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_16313 No alias LWD circadian clock activation factor 0.05 Archaeplastida
Mp5g01830.1 No alias LWD circadian clock activation factor 0.02 Archaeplastida
Mp5g06230.1 No alias WD repeat-containing protein LWD1 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 246 281
IPR001680 WD40_repeat 160 191
No external refs found!