AT2G23770

Description : protein kinase family protein / peptidoglycan-binding LysM domain-containing protein

Gene families : OG0001523 (Archaeplastida) Phylogenetic Tree(s): OG0001523_tree ,
OG_05_0000985 (LandPlants) Phylogenetic Tree(s): OG_05_0000985_tree ,
OG_06_0001825 (SeedPlants) Phylogenetic Tree(s): OG_06_0001825_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G23770
Cluster	HCCA: Cluster_193

Target	Alias	Description	ECC score	Gene Family Method
Gb_09697	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.03	Archaeplastida
Gb_20450	No alias	protein kinase (LysM). LysM receptor kinase (NFR5/NFP)	0.02	Archaeplastida
LOC_Os02g09960.1	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.02	Archaeplastida
LOC_Os06g41980.1	No alias	protein kinase (LysM)	0.02	Archaeplastida
MA_112604g0010	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.02	Archaeplastida
MA_159816g0020	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.02	Archaeplastida
MA_168820g0010	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.02	Archaeplastida
Mp8g11780.1	No alias	protein kinase (LysM)	0.02	Archaeplastida
Solyc02g089900.1.1	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.03	Archaeplastida
Solyc09g083210.3.1	No alias	protein kinase (LysM). LysM receptor kinase (NFR5/NFP)	0.03	Archaeplastida
Zm00001e025053_P001	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0002237	response to molecule of bacterial origin	None	Extended
BP	GO:0002376	immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
MF	GO:0008061	chitin binding	IDA	Interproscan
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010200	response to chitin	None	Extended
BP	GO:0010243	response to organonitrogen compound	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016301	kinase activity	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
BP	GO:0035690	cellular response to drug	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042493	response to drug	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045087	innate immune response	IMP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071216	cellular response to biotic stimulus	None	Extended
BP	GO:0071219	cellular response to molecule of bacterial origin	IEP	Interproscan
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071323	cellular response to chitin	IEP	Interproscan
BP	GO:0071417	cellular response to organonitrogen compound	None	Extended
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901699	cellular response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	IEP	Neighborhood
CC	GO:0000775	chromosome, centromeric region	IEP	Neighborhood
CC	GO:0000781	chromosome, telomeric region	IEP	Neighborhood
BP	GO:0002218	activation of innate immune response	IEP	Neighborhood
BP	GO:0002220	innate immune response activating cell surface receptor signaling pathway	IEP	Neighborhood
BP	GO:0002221	pattern recognition receptor signaling pathway	IEP	Neighborhood
BP	GO:0002238	response to molecule of fungal origin	IEP	Neighborhood
BP	GO:0002253	activation of immune response	IEP	Neighborhood
BP	GO:0002429	immune response-activating cell surface receptor signaling pathway	IEP	Neighborhood
BP	GO:0002679	respiratory burst involved in defense response	IEP	Neighborhood
BP	GO:0002684	positive regulation of immune system process	IEP	Neighborhood
BP	GO:0002752	cell surface pattern recognition receptor signaling pathway	IEP	Neighborhood
BP	GO:0002757	immune response-activating signal transduction	IEP	Neighborhood
BP	GO:0002758	innate immune response-activating signal transduction	IEP	Neighborhood
BP	GO:0002764	immune response-regulating signaling pathway	IEP	Neighborhood
BP	GO:0002768	immune response-regulating cell surface receptor signaling pathway	IEP	Neighborhood
MF	GO:0003958	NADPH-hemoprotein reductase activity	IEP	Neighborhood
MF	GO:0004372	glycine hydroxymethyltransferase activity	IEP	Neighborhood
MF	GO:0004430	1-phosphatidylinositol 4-kinase activity	IEP	Neighborhood
MF	GO:0004448	isocitrate dehydrogenase activity	IEP	Neighborhood
MF	GO:0004449	isocitrate dehydrogenase (NAD+) activity	IEP	Neighborhood
MF	GO:0004864	protein phosphatase inhibitor activity	IEP	Neighborhood
MF	GO:0005047	signal recognition particle binding	IEP	Neighborhood
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005457	GDP-fucose transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005459	UDP-galactose transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005460	UDP-glucose transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006102	isocitrate metabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006486	protein glycosylation	IEP	Neighborhood
BP	GO:0006491	N-glycan processing	IEP	Neighborhood
BP	GO:0006493	protein O-linked glycosylation	IEP	Neighborhood
BP	GO:0006517	protein deglycosylation	IEP	Neighborhood
BP	GO:0006563	L-serine metabolic process	IEP	Neighborhood
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Neighborhood
BP	GO:0006749	glutathione metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0006954	inflammatory response	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0008142	oxysterol binding	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008420	RNA polymerase II CTD heptapeptide repeat phosphatase activity	IEP	Neighborhood
BP	GO:0009100	glycoprotein metabolic process	IEP	Neighborhood
BP	GO:0009266	response to temperature stimulus	IEP	Neighborhood
BP	GO:0009314	response to radiation	IEP	Neighborhood
BP	GO:0009409	response to cold	IEP	Neighborhood
BP	GO:0009416	response to light stimulus	IEP	Neighborhood
BP	GO:0009606	tropism	IEP	Neighborhood
BP	GO:0009620	response to fungus	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
BP	GO:0009629	response to gravity	IEP	Neighborhood
BP	GO:0009630	gravitropism	IEP	Neighborhood
BP	GO:0009636	response to toxic substance	IEP	Neighborhood
BP	GO:0009642	response to light intensity	IEP	Neighborhood
BP	GO:0009644	response to high light intensity	IEP	Neighborhood
BP	GO:0009648	photoperiodism	IEP	Neighborhood
BP	GO:0009696	salicylic acid metabolic process	IEP	Neighborhood
BP	GO:0009697	salicylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0009704	de-etiolation	IEP	Neighborhood
BP	GO:0009756	carbohydrate mediated signaling	IEP	Neighborhood
MF	GO:0009824	AMP dimethylallyltransferase activity	IEP	Neighborhood
BP	GO:0009868	jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway	IEP	Neighborhood
CC	GO:0009897	external side of plasma membrane	IEP	Neighborhood
BP	GO:0009933	meristem structural organization	IEP	Neighborhood
BP	GO:0010048	vernalization response	IEP	Neighborhood
BP	GO:0010182	sugar mediated signaling pathway	IEP	Neighborhood
BP	GO:0010204	defense response signaling pathway, resistance gene-independent	IEP	Neighborhood
BP	GO:0010921	regulation of phosphatase activity	IEP	Neighborhood
BP	GO:0010959	regulation of metal ion transport	IEP	Neighborhood
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Neighborhood
BP	GO:0015783	GDP-fucose transmembrane transport	IEP	Neighborhood
BP	GO:0015786	UDP-glucose transmembrane transport	IEP	Neighborhood
MF	GO:0016208	AMP binding	IEP	Neighborhood
MF	GO:0016653	oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor	IEP	Neighborhood
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Neighborhood
BP	GO:0016999	antibiotic metabolic process	IEP	Neighborhood
BP	GO:0017000	antibiotic biosynthetic process	IEP	Neighborhood
BP	GO:0017144	drug metabolic process	IEP	Neighborhood
MF	GO:0019208	phosphatase regulator activity	IEP	Neighborhood
MF	GO:0019212	phosphatase inhibitor activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0019888	protein phosphatase regulator activity	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	Neighborhood
CC	GO:0031306	intrinsic component of mitochondrial outer membrane	IEP	Neighborhood
CC	GO:0031307	integral component of mitochondrial outer membrane	IEP	Neighborhood
BP	GO:0031349	positive regulation of defense response	IEP	Neighborhood
BP	GO:0032490	detection of molecule of bacterial origin	IEP	Neighborhood
BP	GO:0032491	detection of molecule of fungal origin	IEP	Neighborhood
BP	GO:0032494	response to peptidoglycan	IEP	Neighborhood
BP	GO:0032499	detection of peptidoglycan	IEP	Neighborhood
CC	GO:0032592	integral component of mitochondrial membrane	IEP	Neighborhood
BP	GO:0032784	regulation of DNA-templated transcription, elongation	IEP	Neighborhood
MF	GO:0032934	sterol binding	IEP	Neighborhood
BP	GO:0033609	oxalate metabolic process	IEP	Neighborhood
BP	GO:0033611	oxalate catabolic process	IEP	Neighborhood
MF	GO:0033925	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	IEP	Neighborhood
MF	GO:0036080	purine nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0042127	regulation of cell proliferation	IEP	Neighborhood
BP	GO:0042537	benzene-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042542	response to hydrogen peroxide	IEP	Neighborhood
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Neighborhood
BP	GO:0043270	positive regulation of ion transport	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0043413	macromolecule glycosylation	IEP	Neighborhood
BP	GO:0043434	response to peptide hormone	IEP	Neighborhood
BP	GO:0043649	dicarboxylic acid catabolic process	IEP	Neighborhood
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
CC	GO:0044427	chromosomal part	IEP	Neighborhood
BP	GO:0045089	positive regulation of innate immune response	IEP	Neighborhood
BP	GO:0045730	respiratory burst	IEP	Neighborhood
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0046482	para-aminobenzoic acid metabolic process	IEP	Neighborhood
BP	GO:0046486	glycerolipid metabolic process	IEP	Neighborhood
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Neighborhood
BP	GO:0046677	response to antibiotic	IEP	Neighborhood
BP	GO:0046834	lipid phosphorylation	IEP	Neighborhood
BP	GO:0046854	phosphatidylinositol phosphorylation	IEP	Neighborhood
BP	GO:0048358	mucilage pectin biosynthetic process	IEP	Neighborhood
BP	GO:0048363	mucilage pectin metabolic process	IEP	Neighborhood
BP	GO:0048438	floral whorl development	IEP	Neighborhood
BP	GO:0048467	gynoecium development	IEP	Neighborhood
BP	GO:0048518	positive regulation of biological process	IEP	Neighborhood
BP	GO:0048573	photoperiodism, flowering	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
MF	GO:0050203	oxalate-CoA ligase activity	IEP	Neighborhood
BP	GO:0050778	positive regulation of immune response	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0050826	response to freezing	IEP	Neighborhood
BP	GO:0051050	positive regulation of transport	IEP	Neighborhood
BP	GO:0051707	response to other organism	IEP	Neighborhood
BP	GO:0051924	regulation of calcium ion transport	IEP	Neighborhood
BP	GO:0051928	positive regulation of calcium ion transport	IEP	Neighborhood
MF	GO:0052622	ATP dimethylallyltransferase activity	IEP	Neighborhood
MF	GO:0052623	ADP dimethylallyltransferase activity	IEP	Neighborhood
MF	GO:0052742	phosphatidylinositol kinase activity	IEP	Neighborhood
BP	GO:0060416	response to growth hormone	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0070085	glycosylation	IEP	Neighborhood
MF	GO:0070405	ammonium ion binding	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:0072334	UDP-galactose transmembrane transport	IEP	Neighborhood
BP	GO:0080148	negative regulation of response to water deprivation	IEP	Neighborhood
BP	GO:0080163	regulation of protein serine/threonine phosphatase activity	IEP	Neighborhood
BP	GO:0090480	purine nucleotide-sugar transmembrane transport	IEP	Neighborhood
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Neighborhood
CC	GO:0098552	side of membrane	IEP	Neighborhood
CC	GO:0098687	chromosomal region	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
BP	GO:1901652	response to peptide	IEP	Neighborhood
BP	GO:2000070	regulation of response to water deprivation	IEP	Neighborhood
MF	GO:2001080	chitosan binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	385	594
IPR018392	LysM_dom	188	232
IPR018392	LysM_dom	121	166

External Links

No external refs found!

AT2G23770

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation