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  5. Gb_09554

Gb_09554


Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana (sp|p31843|rrpo_oenbe : 127.0)


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000425 (LandPlants) Phylogenetic Tree(s): OG_05_0000425_tree ,
OG_06_0000247 (SeedPlants) Phylogenetic Tree(s): OG_06_0000247_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09554
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
Gb_00235 No alias Uncharacterized mitochondrial protein AtMg00860... 0.07 Archaeplastida
Gb_00684 No alias Uncharacterized mitochondrial protein AtMg00860... 0.08 Archaeplastida
Gb_01711 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.16 Archaeplastida
Gb_02281 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.12 Archaeplastida
Gb_02835 No alias no hits & (original description: none) 0.16 Archaeplastida
Gb_03156 No alias Uncharacterized mitochondrial protein AtMg00860... 0.07 Archaeplastida
Gb_03956 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_03978 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_04108 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_04560 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_06149 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.12 Archaeplastida
Gb_09706 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_10189 No alias Uncharacterized mitochondrial protein AtMg00860... 0.09 Archaeplastida
Gb_12173 No alias Uncharacterized mitochondrial protein AtMg00860... 0.07 Archaeplastida
Gb_13328 No alias no hits & (original description: none) 0.12 Archaeplastida
Gb_14507 No alias no hits & (original description: none) 0.1 Archaeplastida
Gb_15353 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_15436 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.09 Archaeplastida
Gb_16342 No alias Uncharacterized mitochondrial protein AtMg00860... 0.14 Archaeplastida
Gb_17315 No alias Uncharacterized mitochondrial protein AtMg00860... 0.1 Archaeplastida
Gb_17590 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
Gb_18223 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.09 Archaeplastida
Gb_18576 No alias no hits & (original description: none) 0.09 Archaeplastida
Gb_18747 No alias Uncharacterized mitochondrial protein AtMg00860... 0.08 Archaeplastida
Gb_18762 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_19531 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_20044 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.08 Archaeplastida
Gb_21092 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_21108 No alias Uncharacterized mitochondrial protein AtMg00860... 0.09 Archaeplastida
Gb_21346 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.1 Archaeplastida
Gb_21502 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_21600 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_21943 No alias Uncharacterized mitochondrial protein AtMg00860... 0.08 Archaeplastida
Gb_23281 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.09 Archaeplastida
Gb_23550 No alias no hits & (original description: none) 0.12 Archaeplastida
Gb_23709 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.1 Archaeplastida
Gb_23759 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.11 Archaeplastida
Gb_24142 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_25344 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_26446 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_28322 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_30072 No alias Uncharacterized mitochondrial protein AtMg00860... 0.11 Archaeplastida
Gb_30122 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_30475 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Gb_30972 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_32815 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_33106 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.08 Archaeplastida
Gb_33301 No alias Uncharacterized mitochondrial protein AtMg00860... 0.1 Archaeplastida
Gb_33342 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_34869 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_35936 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.11 Archaeplastida
Gb_36033 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_36303 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.09 Archaeplastida
Gb_36965 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_37445 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_38300 No alias no hits & (original description: none) 0.11 Archaeplastida
Gb_38708 No alias Uncharacterized mitochondrial protein AtMg00860... 0.11 Archaeplastida
Gb_39593 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_39684 No alias Uncharacterized mitochondrial protein AtMg00860... 0.15 Archaeplastida
Gb_40215 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.11 Archaeplastida
Gb_40970 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Pp3c17_2370V3.1 No alias DNA/RNA polymerases superfamily protein 0.02 Archaeplastida
Pp3c3_35120V3.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR000477 RT_dom 111 271
No external refs found!