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  5. Gb_10245

Gb_10245


Description : CTL cellulose microfibrils and hemicellulose interaction protein


Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0002919 (LandPlants) Phylogenetic Tree(s): OG_05_0002919_tree ,
OG_06_0003490 (SeedPlants) Phylogenetic Tree(s): OG_06_0003490_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10245
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00097040 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.06 Archaeplastida
AT1G05850 HOT2, ELP,... Chitinase family protein 0.08 Archaeplastida
AT2G43600 No alias Chitinase family protein 0.03 Archaeplastida
AT2G43610 No alias Chitinase family protein 0.04 Archaeplastida
AT3G16920 CTL2, ATCTL2 chitinase-like protein 2 0.06 Archaeplastida
GSVIVT01031685001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.06 Archaeplastida
GSVIVT01035029001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.05 Archaeplastida
Gb_05672 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
LOC_Os05g04690.1 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os08g41100.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
LOC_Os09g32080.2 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.09 Archaeplastida
MA_114934g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
MA_159244g0020 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 251.0) 0.02 Archaeplastida
MA_726207g0010 No alias Chitinase-like protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_80085g0010 No alias Basic endochitinase C OS=Secale cereale... 0.04 Archaeplastida
Mp7g04510.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.06 Archaeplastida
Pp3c13_18820V3.1 No alias Chitinase family protein 0.03 Archaeplastida
Pp3c13_4480V3.1 No alias Chitinase family protein 0.04 Archaeplastida
Pp3c24_15000V3.1 No alias Chitinase family protein 0.01 Archaeplastida
Pp3c26_2880V3.1 No alias Chitinase family protein 0.03 Archaeplastida
Smo227948 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.06 Archaeplastida
Smo446851 No alias Endochitinase A2 OS=Pisum sativum 0.03 Archaeplastida
Solyc02g061770.4.1 No alias Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.03 Archaeplastida
Solyc04g072000.4.1 No alias Endochitinase EP3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc06g053380.3.1 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Solyc09g098540.3.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.09 Archaeplastida
Zm00001e027534_P001 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e034566_P001 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 49 286
No external refs found!