AT2G24880

Description : Plant self-incompatibility protein S1 family

Gene families : OG0006478 (Archaeplastida) Phylogenetic Tree(s): OG0006478_tree ,
OG_05_0004461 (LandPlants) Phylogenetic Tree(s): OG_05_0004461_tree ,
OG_06_0002874 (SeedPlants) Phylogenetic Tree(s): OG_06_0002874_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G24880
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AT2G06090	No alias	Plant self-incompatibility protein S1 family	0.03	Archaeplastida
AT2G23142	No alias	Plant self-incompatibility protein S1 family	0.09	Archaeplastida
AT4G29037	No alias	No description available	0.07	Archaeplastida
AT5G04350	No alias	Plant self-incompatibility protein S1 family	0.09	Archaeplastida
AT5G27238	No alias	Plant self-incompatibility protein S1 family	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005576	extracellular region	IEP	Neighborhood
BP	GO:0006349	regulation of gene expression by genetic imprinting	IEP	Neighborhood
BP	GO:0006869	lipid transport	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
BP	GO:0009299	mRNA transcription	IEP	Neighborhood
CC	GO:0031350	intrinsic component of plastid membrane	IEP	Neighborhood
CC	GO:0031351	integral component of plastid membrane	IEP	Neighborhood
BP	GO:0071514	genetic imprinting	IEP	Neighborhood
BP	GO:0080050	regulation of seed development	IEP	Neighborhood
BP	GO:2000014	regulation of endosperm development	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR010264	Self-incomp_S1	25	97

External Links

No external refs found!