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  5. Gb_10373

Gb_10373


Description : histone (H4)


Gene families : OG0000170 (Archaeplastida) Phylogenetic Tree(s): OG0000170_tree ,
OG_05_0000135 (LandPlants) Phylogenetic Tree(s): OG_05_0000135_tree ,
OG_06_0000106 (SeedPlants) Phylogenetic Tree(s): OG_06_0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10373
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271490 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.03 Archaeplastida
AMTR_s00003p00201000 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
AMTR_s00003p00256370 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
AT1G07820 No alias Histone superfamily protein 0.06 Archaeplastida
AT2G28740 HIS4 histone H4 0.08 Archaeplastida
AT3G45930 No alias Histone superfamily protein 0.18 Archaeplastida
AT3G46320 No alias Histone superfamily protein 0.14 Archaeplastida
AT3G53730 No alias Histone superfamily protein 0.11 Archaeplastida
AT5G59690 No alias Histone superfamily protein 0.11 Archaeplastida
AT5G59970 No alias Histone superfamily protein 0.15 Archaeplastida
Cre06.g264600 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre06.g265050 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre06.g265200 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre06.g265450 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre06.g266600 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre06.g268000 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre06.g268400 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre06.g271300 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre06.g274150 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre06.g274300 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre06.g274900 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre06.g275700 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre06.g276650 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre06.g276800 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre12.g504600 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre12.g504850 No alias Chromatin organisation.histones.H4-type histone 0.08 Archaeplastida
Cre12.g505450 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre12.g506350 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre12.g506450 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre17.g708200 No alias Chromatin organisation.histones.H4-type histone 0.01 Archaeplastida
Cre17.g708650 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
Cre17.g709100 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
GSVIVT01016576001 No alias Chromatin organisation.histones.H4-type histone 0.05 Archaeplastida
GSVIVT01016577001 No alias Chromatin organisation.histones.H4-type histone 0.05 Archaeplastida
GSVIVT01016578001 No alias Chromatin organisation.histones.H4-type histone 0.03 Archaeplastida
GSVIVT01025005001 No alias Chromatin organisation.histones.H4-type histone 0.07 Archaeplastida
GSVIVT01032631001 No alias Chromatin organisation.histones.H4-type histone 0.06 Archaeplastida
Gb_15454 No alias histone (H4) 0.04 Archaeplastida
Gb_15455 No alias histone (H4) 0.04 Archaeplastida
Gb_20453 No alias histone (H4) 0.05 Archaeplastida
Gb_25031 No alias histone (H4) 0.04 Archaeplastida
LOC_Os01g61920.1 No alias histone (H4) 0.08 Archaeplastida
LOC_Os02g45940.1 No alias histone (H4) 0.09 Archaeplastida
LOC_Os03g02780.1 No alias histone (H4) 0.09 Archaeplastida
LOC_Os04g49420.1 No alias histone (H4) 0.03 Archaeplastida
LOC_Os05g38740.1 No alias histone (H4) 0.03 Archaeplastida
LOC_Os05g38760.1 No alias histone (H4) 0.02 Archaeplastida
LOC_Os05g39050.1 No alias histone (H4) 0.06 Archaeplastida
LOC_Os07g36500.1 No alias histone (H4) 0.07 Archaeplastida
LOC_Os09g26340.1 No alias histone (H4) 0.09 Archaeplastida
LOC_Os09g38020.1 No alias histone (H4) 0.1 Archaeplastida
LOC_Os10g39410.1 No alias histone (H4) 0.03 Archaeplastida
MA_10427181g0010 No alias histone (H4) 0.04 Archaeplastida
MA_10433778g0010 No alias histone (H4) 0.06 Archaeplastida
MA_116904g0010 No alias histone (H4) 0.07 Archaeplastida
MA_141877g0030 No alias histone (H4) 0.04 Archaeplastida
MA_234535g0010 No alias histone (H4) 0.05 Archaeplastida
MA_465285g0010 No alias histone (H4) 0.06 Archaeplastida
MA_713159g0010 No alias histone (H4) 0.09 Archaeplastida
MA_73436g0010 No alias histone (H4) 0.03 Archaeplastida
MA_74102g0010 No alias histone (H4) 0.05 Archaeplastida
MA_83574g0010 No alias histone (H4) 0.03 Archaeplastida
MA_89764g0010 No alias histone (H4) 0.04 Archaeplastida
MA_9266178g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_97951g0010 No alias histone (H4) 0.03 Archaeplastida
Mp4g03080.1 No alias histone (H4) 0.03 Archaeplastida
Mp4g03090.1 No alias histone (H4) 0.04 Archaeplastida
Mp4g13430.1 No alias histone (H4) 0.04 Archaeplastida
Mp4g13440.1 No alias histone (H4) 0.03 Archaeplastida
Mp5g16840.1 No alias histone (H4) 0.04 Archaeplastida
Mp5g22460.1 No alias histone (H4) 0.03 Archaeplastida
Mp5g22470.1 No alias histone (H4) 0.03 Archaeplastida
Pp3c13_5310V3.1 No alias Histone superfamily protein 0.03 Archaeplastida
Pp3c22_22340V3.1 No alias histone H4 0.06 Archaeplastida
Pp3c4_22160V3.1 No alias Histone superfamily protein 0.03 Archaeplastida
Pp3c7_22150V3.1 No alias histone H4 0.02 Archaeplastida
Smo167497 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Smo233579 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
Solyc04g011390.1.1 No alias histone (H4) 0.11 Archaeplastida
Solyc05g054610.1.1 No alias histone (H4) 0.1 Archaeplastida
Solyc06g005420.1.1 No alias histone (H4) 0.12 Archaeplastida
Solyc06g005430.1.1 No alias histone (H4) 0.07 Archaeplastida
Solyc06g072240.1.1 No alias histone (H4) 0.09 Archaeplastida
Solyc06g075830.2.1 No alias histone (H4) 0.14 Archaeplastida
Solyc06g075850.1.1 No alias histone (H4) 0.04 Archaeplastida
Solyc06g075930.1.1 No alias histone (H4) 0.09 Archaeplastida
Solyc06g075960.1.1 No alias histone (H4) 0.11 Archaeplastida
Solyc11g066160.1.1 No alias histone (H4) 0.12 Archaeplastida
Solyc11g072840.1.1 No alias histone (H4) 0.12 Archaeplastida
Solyc11g072860.2.1 No alias histone (H4) 0.16 Archaeplastida
Zm00001e007138_P001 No alias histone (H4) 0.09 Archaeplastida
Zm00001e009859_P001 No alias histone (H4) 0.08 Archaeplastida
Zm00001e016816_P001 No alias histone (H4) 0.07 Archaeplastida
Zm00001e019368_P001 No alias histone (H4) 0.05 Archaeplastida
Zm00001e023245_P001 No alias histone (H4) 0.08 Archaeplastida
Zm00001e025845_P001 No alias histone (H4) 0.04 Archaeplastida
Zm00001e027269_P001 No alias histone (H4) 0.06 Archaeplastida
Zm00001e034229_P001 No alias histone (H4) 0.08 Archaeplastida
Zm00001e034230_P001 No alias histone (H4) 0.08 Archaeplastida
Zm00001e034964_P001 No alias histone (H4) 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009262 deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
CC GO:0032299 ribonuclease H2 complex IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!