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  5. Gb_10463

Gb_10463


Description : Pentatricopeptide repeat-containing protein At1g79540 OS=Arabidopsis thaliana (sp|q9saj5|pp133_arath : 580.0)


Gene families : OG0009632 (Archaeplastida) Phylogenetic Tree(s): OG0009632_tree ,
OG_05_0009626 (LandPlants) Phylogenetic Tree(s): OG_05_0009626_tree ,
OG_06_0007907 (SeedPlants) Phylogenetic Tree(s): OG_06_0007907_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10463
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01033259001 No alias Pentatricopeptide repeat-containing protein At1g79540... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0016255 attachment of GPI anchor to protein IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 838 865
IPR002885 Pentatricopeptide_repeat 228 256
IPR002885 Pentatricopeptide_repeat 297 342
IPR002885 Pentatricopeptide_repeat 764 812
IPR002885 Pentatricopeptide_repeat 503 552
IPR002885 Pentatricopeptide_repeat 433 482
IPR002885 Pentatricopeptide_repeat 363 411
IPR002885 Pentatricopeptide_repeat 621 670
IPR002885 Pentatricopeptide_repeat 687 716
No external refs found!