AT2G25140 (CLPB4, CLPB-M, HSP98.7)

Aliases : CLPB4, CLPB-M, HSP98.7

Description : casein lytic proteinase B4

Gene families : OG0000276 (Archaeplastida) Phylogenetic Tree(s): OG0000276_tree ,
OG_05_0002603 (LandPlants) Phylogenetic Tree(s): OG_05_0002603_tree ,
OG_06_0004579 (SeedPlants) Phylogenetic Tree(s): OG_06_0004579_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G25140
Cluster	HCCA: Cluster_140

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00086p00119290	evm_27.TU.AmTr_v1...	External stimuli response.temperature.Hsp...	0.03	Archaeplastida
Cre10.g465550	No alias	Chaperone protein ClpB2, chloroplastic OS=Oryza sativa...	0.02	Archaeplastida
Cre11.g467575	No alias	External stimuli response.temperature.Hsp...	0.02	Archaeplastida
Cre11.g467644	No alias	External stimuli response.temperature.Hsp...	0.06	Archaeplastida
GSVIVT01007880001	No alias	External stimuli response.temperature.Hsp...	0.12	Archaeplastida
GSVIVT01011496001	No alias	External stimuli response.temperature.Hsp...	0.11	Archaeplastida
GSVIVT01035900001	No alias	External stimuli response.temperature.Hsp...	0.11	Archaeplastida
Gb_21271	No alias	cytosolic chaperone (Hsp101)	0.02	Archaeplastida
Gb_39383	No alias	cytosolic chaperone (Hsp101)	0.07	Archaeplastida
LOC_Os02g08490.1	No alias	organellar chaperone (Clp-p\|Clp-m)	0.16	Archaeplastida
LOC_Os02g32520.1	No alias	chaperone component ClpD of chloroplast Clp-type protease complex	0.03	Archaeplastida
LOC_Os03g31300.1	No alias	organellar chaperone (Clp-p\|Clp-m)	0.15	Archaeplastida
LOC_Os05g44340.1	No alias	cytosolic chaperone (Hsp101)	0.15	Archaeplastida
MA_21130g0010	No alias	Chaperone protein ClpB1 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_229920g0010	No alias	Chaperone protein ClpB2, chloroplastic OS=Oryza sativa...	0.03	Archaeplastida
Pp3c19_4790V3.1	No alias	heat shock protein 101	0.08	Archaeplastida
Pp3c21_5430V3.1	No alias	Clp ATPase	0.02	Archaeplastida
Pp3c24_9060V3.1	No alias	casein lytic proteinase B3	0.08	Archaeplastida
Pp3c8_12320V3.1	No alias	casein lytic proteinase B3	0.03	Archaeplastida
Smo170696	No alias	External stimuli response.temperature.Hsp...	0.1	Archaeplastida
Smo174539	No alias	External stimuli response.temperature.Hsp...	0.11	Archaeplastida
Smo411118	No alias	External stimuli response.temperature.Hsp...	0.14	Archaeplastida
Smo418380	No alias	External stimuli response.temperature.Hsp...	0.04	Archaeplastida
Solyc02g088610.4.1	No alias	organellar chaperone (Clp-p\|Clp-m)	0.08	Archaeplastida
Solyc03g115230.3.1	No alias	cytosolic chaperone (Hsp101)	0.08	Archaeplastida
Solyc06g011380.2.1	No alias	Chaperone protein ClpB4, mitochondrial OS=Arabidopsis...	0.09	Archaeplastida
Solyc06g011400.2.1	No alias	Chaperone protein ClpB4, mitochondrial OS=Arabidopsis...	0.1	Archaeplastida
Zm00001e002026_P002	No alias	organellar chaperone (Clp-p\|Clp-m)	0.15	Archaeplastida
Zm00001e013843_P002	No alias	organellar chaperone (Clp-p\|Clp-m)	0.05	Archaeplastida
Zm00001e032223_P001	No alias	cytosolic chaperone (Hsp101)	0.15	Archaeplastida
Zm00001e038056_P001	No alias	organellar chaperone (Clp-p\|Clp-m)	0.16	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0000302	response to reactive oxygen species	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006457	protein folding	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009408	response to heat	ISS	Interproscan
BP	GO:0009408	response to heat	RCA	Interproscan
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009636	response to toxic substance	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	RCA	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	ISS	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042493	response to drug	None	Extended
BP	GO:0042542	response to hydrogen peroxide	RCA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044434	chloroplast part	None	Extended
CC	GO:0044435	plastid part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046677	response to antibiotic	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Neighborhood
MF	GO:0001664	G-protein coupled receptor binding	IEP	Neighborhood
MF	GO:0002020	protease binding	IEP	Neighborhood
BP	GO:0002252	immune effector process	IEP	Neighborhood
BP	GO:0002679	respiratory burst involved in defense response	IEP	Neighborhood
BP	GO:0002682	regulation of immune system process	IEP	Neighborhood
MF	GO:0004619	phosphoglycerate mutase activity	IEP	Neighborhood
MF	GO:0004765	shikimate kinase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
CC	GO:0005681	spliceosomal complex	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
CC	GO:0005788	endoplasmic reticulum lumen	IEP	Neighborhood
CC	GO:0005829	cytosol	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
CC	GO:0005911	cell-cell junction	IEP	Neighborhood
BP	GO:0006376	mRNA splice site selection	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006497	protein lipidation	IEP	Neighborhood
BP	GO:0006498	N-terminal protein lipidation	IEP	Neighborhood
BP	GO:0006499	N-terminal protein myristoylation	IEP	Neighborhood
BP	GO:0006605	protein targeting	IEP	Neighborhood
BP	GO:0006612	protein targeting to membrane	IEP	Neighborhood
BP	GO:0006855	drug transmembrane transport	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0006970	response to osmotic stress	IEP	Neighborhood
BP	GO:0006972	hyperosmotic response	IEP	Neighborhood
BP	GO:0006986	response to unfolded protein	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0007186	G-protein coupled receptor signaling pathway	IEP	Neighborhood
BP	GO:0007187	G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger	IEP	Neighborhood
BP	GO:0007188	adenylate cyclase-modulating G-protein coupled receptor signaling pathway	IEP	Neighborhood
MF	GO:0008422	beta-glucosidase activity	IEP	Neighborhood
BP	GO:0009404	toxin metabolic process	IEP	Neighborhood
BP	GO:0009407	toxin catabolic process	IEP	Neighborhood
BP	GO:0009414	response to water deprivation	IEP	Neighborhood
BP	GO:0009415	response to water	IEP	Neighborhood
CC	GO:0009506	plasmodesma	IEP	Neighborhood
BP	GO:0009607	response to biotic stimulus	IEP	Neighborhood
BP	GO:0009611	response to wounding	IEP	Neighborhood
BP	GO:0009615	response to virus	IEP	Neighborhood
BP	GO:0009650	UV protection	IEP	Neighborhood
BP	GO:0009651	response to salt stress	IEP	Neighborhood
BP	GO:0009652	thigmotropism	IEP	Neighborhood
BP	GO:0009695	jasmonic acid biosynthetic process	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009723	response to ethylene	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009737	response to abscisic acid	IEP	Neighborhood
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	Neighborhood
BP	GO:0009753	response to jasmonic acid	IEP	Neighborhood
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Neighborhood
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEP	Neighborhood
BP	GO:0009877	nodulation	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010038	response to metal ion	IEP	Neighborhood
BP	GO:0010200	response to chitin	IEP	Neighborhood
BP	GO:0010243	response to organonitrogen compound	IEP	Neighborhood
BP	GO:0010286	heat acclimation	IEP	Neighborhood
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	Neighborhood
BP	GO:0010555	response to mannitol	IEP	Neighborhood
BP	GO:0010941	regulation of cell death	IEP	Neighborhood
BP	GO:0010942	positive regulation of cell death	IEP	Neighborhood
BP	GO:0012502	induction of programmed cell death	IEP	Neighborhood
BP	GO:0016145	S-glycoside catabolic process	IEP	Neighborhood
CC	GO:0016363	nuclear matrix	IEP	Neighborhood
BP	GO:0016574	histone ubiquitination	IEP	Neighborhood
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Neighborhood
BP	GO:0018377	protein myristoylation	IEP	Neighborhood
MF	GO:0019137	thioglucosidase activity	IEP	Neighborhood
BP	GO:0019632	shikimate metabolic process	IEP	Neighborhood
BP	GO:0019759	glycosinolate catabolic process	IEP	Neighborhood
BP	GO:0019762	glucosinolate catabolic process	IEP	Neighborhood
CC	GO:0019897	extrinsic component of plasma membrane	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	Neighborhood
CC	GO:0030054	cell junction	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
MF	GO:0030544	Hsp70 protein binding	IEP	Neighborhood
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	Neighborhood
MF	GO:0031072	heat shock protein binding	IEP	Neighborhood
CC	GO:0031234	extrinsic component of cytoplasmic side of plasma membrane	IEP	Neighborhood
BP	GO:0031347	regulation of defense response	IEP	Neighborhood
BP	GO:0031365	N-terminal protein amino acid modification	IEP	Neighborhood
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Neighborhood
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	Neighborhood
CC	GO:0031974	membrane-enclosed lumen	IEP	Neighborhood
MF	GO:0032266	phosphatidylinositol-3-phosphate binding	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
BP	GO:0033037	polysaccharide localization	IEP	Neighborhood
BP	GO:0033523	histone H2B ubiquitination	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Neighborhood
BP	GO:0034605	cellular response to heat	IEP	Neighborhood
BP	GO:0034620	cellular response to unfolded protein	IEP	Neighborhood
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	Neighborhood
CC	GO:0035061	interchromatin granule	IEP	Neighborhood
BP	GO:0035967	cellular response to topologically incorrect protein	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0042180	cellular ketone metabolic process	IEP	Neighborhood
BP	GO:0042538	hyperosmotic salinity response	IEP	Neighborhood
BP	GO:0043067	regulation of programmed cell death	IEP	Neighborhood
BP	GO:0043068	positive regulation of programmed cell death	IEP	Neighborhood
BP	GO:0043069	negative regulation of programmed cell death	IEP	Neighborhood
BP	GO:0043207	response to external biotic stimulus	IEP	Neighborhood
CC	GO:0043233	organelle lumen	IEP	Neighborhood
BP	GO:0043335	protein unfolding	IEP	Neighborhood
BP	GO:0043462	regulation of ATPase activity	IEP	Neighborhood
BP	GO:0043484	regulation of RNA splicing	IEP	Neighborhood
BP	GO:0043543	protein acylation	IEP	Neighborhood
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Neighborhood
BP	GO:0044403	symbiont process	IEP	Neighborhood
BP	GO:0045088	regulation of innate immune response	IEP	Neighborhood
BP	GO:0045727	positive regulation of translation	IEP	Neighborhood
BP	GO:0045730	respiratory burst	IEP	Neighborhood
BP	GO:0046165	alcohol biosynthetic process	IEP	Neighborhood
MF	GO:0046537	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	IEP	Neighborhood
BP	GO:0046686	response to cadmium ion	IEP	Neighborhood
BP	GO:0048024	regulation of mRNA splicing, via spliceosome	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
BP	GO:0048583	regulation of response to stimulus	IEP	Neighborhood
BP	GO:0050684	regulation of mRNA processing	IEP	Neighborhood
BP	GO:0050776	regulation of immune response	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051704	multi-organism process	IEP	Neighborhood
BP	GO:0051707	response to other organism	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
BP	GO:0052542	defense response by callose deposition	IEP	Neighborhood
BP	GO:0052545	callose localization	IEP	Neighborhood
BP	GO:0060548	negative regulation of cell death	IEP	Neighborhood
CC	GO:0070013	intracellular organelle lumen	IEP	Neighborhood
BP	GO:0070370	cellular heat acclimation	IEP	Neighborhood
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Neighborhood
CC	GO:0071944	cell periphery	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
MF	GO:0080025	phosphatidylinositol-3,5-bisphosphate binding	IEP	Neighborhood
BP	GO:0080134	regulation of response to stress	IEP	Neighborhood
BP	GO:0080135	regulation of cellular response to stress	IEP	Neighborhood
BP	GO:0080167	response to karrikin	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood
BP	GO:0097305	response to alcohol	IEP	Neighborhood
BP	GO:0098754	detoxification	IEP	Neighborhood
BP	GO:1901421	positive regulation of response to alcohol	IEP	Neighborhood
BP	GO:1901698	response to nitrogen compound	IEP	Neighborhood
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	Neighborhood
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	Neighborhood
BP	GO:1903311	regulation of mRNA metabolic process	IEP	Neighborhood
BP	GO:1905421	regulation of plant organ morphogenesis	IEP	Neighborhood
BP	GO:1905959	positive regulation of cellular response to alcohol	IEP	Neighborhood
BP	GO:2000067	regulation of root morphogenesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004176	Clp_N	99	150
IPR004176	Clp_N	176	226
IPR019489	Clp_ATPase_C	857	936
IPR003959	ATPase_AAA_core	285	419
IPR003959	ATPase_AAA_core	681	850

External Links

No external refs found!

AT2G25140 (CLPB4, CLPB-M, HSP98.7)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation