- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 377.0)
Gene families : OG0005439 (Archaeplastida) Phylogenetic Tree(s): OG0005439_tree ,
OG_05_0004179 (LandPlants) Phylogenetic Tree(s): OG_05_0004179_tree ,
OG_06_0002682 (SeedPlants) Phylogenetic Tree(s): OG_06_0002682_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_10548 | |
| Cluster | HCCA: Cluster_51 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_03438 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
| Gb_03475 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
| Gb_03594 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | Archaeplastida | |
| Gb_09610 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
| Gb_13044 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.12 | Archaeplastida | |
| Gb_13936 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.09 | Archaeplastida | |
| Gb_15099 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | Archaeplastida | |
| Gb_17793 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.09 | Archaeplastida | |
| Gb_21384 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.1 | Archaeplastida | |
| Gb_22794 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | Archaeplastida | |
| Gb_24582 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
| Gb_26212 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
| Gb_28029 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
| Gb_31042 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.06 | Archaeplastida | |
| Gb_31462 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.12 | Archaeplastida | |
| Gb_34623 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.09 | Archaeplastida | |
| Gb_36623 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.12 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0015074 | DNA integration | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |