Gb_10809

Description : transcription factor (ERF). transcription factor (ERN1)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0053569 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_10809
Cluster	HCCA: Cluster_153

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00133970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00058p00066390	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.02	Archaeplastida
AMTR_s00068p00102110	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.04	Archaeplastida
AMTR_s00069p00132820	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.04	Archaeplastida
AMTR_s00069p00140780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00099p00122430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00129p00112550	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AT3G57600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G25490	DREB1B, ATCBF1, CBF1	C-repeat/DRE binding factor 1	0.1	Archaeplastida
GSVIVT01002195001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01006277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01015540001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.07	Archaeplastida
GSVIVT01017542001	No alias	Ethylene-responsive transcription factor ERF084...	0.03	Archaeplastida
GSVIVT01018272001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01022277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01027770001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
LOC_Os01g12440.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g45450.1	No alias	Dehydration-responsive element-binding protein 1G...	0.03	Archaeplastida
LOC_Os04g46220.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g49010.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os09g11480.2	No alias	Ethylene-responsive transcription factor ERF112...	0.02	Archaeplastida
LOC_Os10g41130.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os12g41060.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10430769g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_115502g0010	No alias	transcription factor (DREB)	0.06	Archaeplastida
MA_65190g0010	No alias	transcription factor (ERF). transcription factor (ERN1)	0.04	Archaeplastida
MA_71018g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp5g01050.1	No alias	transcription factor (DREB)	0.01	Archaeplastida
Mp5g06970.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Pp3c11_10660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c11_23290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c16_13280V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c1_5010V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c27_6030V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c2_36690V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c4_2530V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c5_810V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c6_16660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c6_19350V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Smo104980	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Solyc01g090300.2.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc02g090800.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g095973.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc03g117130.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e015429_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e023224_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e023816_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e039555_P001	No alias	no hits & (original description: none)	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0004637	phosphoribosylamine-glycine ligase activity	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006144	purine nucleobase metabolic process	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
BP	GO:0009112	nucleobase metabolic process	IEP	Neighborhood
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	Neighborhood
BP	GO:0009250	glucan biosynthetic process	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016759	cellulose synthase activity	IEP	Neighborhood
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
BP	GO:0030244	cellulose biosynthetic process	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0042440	pigment metabolic process	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044249	cellular biosynthetic process	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0046112	nucleobase biosynthetic process	IEP	Neighborhood
BP	GO:0046148	pigment biosynthetic process	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Neighborhood
BP	GO:0072521	purine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	65	115

External Links

No external refs found!

Gb_10809

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation