1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_10951

Gb_10951


Description : component cpSRP54 of thylakoid membrane SRP insertion system


Gene families : OG0004988 (Archaeplastida) Phylogenetic Tree(s): OG0004988_tree ,
OG_05_0005915 (LandPlants) Phylogenetic Tree(s): OG_05_0005915_tree ,
OG_06_0005789 (SeedPlants) Phylogenetic Tree(s): OG_06_0005789_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10951
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00204460 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.thylakoid membrane SRP... 0.09 Archaeplastida
AT5G03940 54CP, SRP54CP,... chloroplast signal recognition particle 54 kDa subunit 0.02 Archaeplastida
Cre11.g479750 No alias Protein translocation.chloroplast.thylakoid membrane SRP... 0.03 Archaeplastida
GSVIVT01033862001 No alias Protein translocation.chloroplast.thylakoid membrane SRP... 0.02 Archaeplastida
LOC_Os11g05552.1 No alias Signal recognition particle 54 kDa protein,... 0.02 Archaeplastida
LOC_Os11g05556.1 No alias component cpSRP54 of thylakoid membrane SRP insertion system 0.04 Archaeplastida
MA_10274946g0010 No alias Signal recognition particle 54 kDa protein,... 0.08 Archaeplastida
MA_357296g0010 No alias Signal recognition particle 54 kDa protein,... 0.03 Archaeplastida
Mp1g05670.1 No alias component cpSRP54 of thylakoid membrane SRP insertion system 0.01 Archaeplastida
Pp3c8_7200V3.1 No alias chloroplast signal recognition particle 54 kDa subunit 0.06 Archaeplastida
Solyc09g009940.3.1 No alias component cpSRP54 of thylakoid membrane SRP insertion system 0.05 Archaeplastida
Zm00001e024147_P003 No alias component cpSRP54 of thylakoid membrane SRP insertion system 0.05 Archaeplastida
Zm00001e039381_P004 No alias component cpSRP54 of thylakoid membrane SRP insertion system 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA Interproscan
MF GO:0008312 7S RNA binding IEA Interproscan
CC GO:0048500 signal recognition particle IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004125 Signal_recog_particle_SRP54_M 415 514
IPR000897 SRP54_GTPase_dom 189 384
IPR013822 Signal_recog_particl_SRP54_hlx 94 171
No external refs found!