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  5. AT2G25700

AT2G25700 (ASK3, SK3)


Aliases : ASK3, SK3

Description : SKP1-like 3


Gene families : OG0000418 (Archaeplastida) Phylogenetic Tree(s): OG0000418_tree ,
OG_05_0000338 (LandPlants) Phylogenetic Tree(s): OG_05_0000338_tree ,
OG_06_0000762 (SeedPlants) Phylogenetic Tree(s): OG_06_0000762_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G25700
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT2G03160 SK19, ASK19 SKP1-like 19 0.07 Archaeplastida
AT2G03170 ASK14, SK14 SKP1-like 14 0.07 Archaeplastida
AT3G21830 SK8, ASK8 SKP1-like 8 0.05 Archaeplastida
AT3G21840 ASK7, SK7 SKP1-like 7 0.05 Archaeplastida
AT3G21850 SK9, ASK9 SKP1-like 9 0.05 Archaeplastida
AT3G21860 ASK10, SK10 SKP1-like 10 0.04 Archaeplastida
AT3G53060 SK6, ASK6 SKP1-like 6 0.02 Archaeplastida
AT3G60010 SK13, ASK13 SKP1-like 13 0.05 Archaeplastida
AT4G34470 SK12, ASK12 SKP1-like 12 0.06 Archaeplastida
LOC_Os09g10200.1 No alias target protein binding component SKP1/ASK1 of... 0.01 Archaeplastida
LOC_Os09g10300.1 No alias target protein binding component SKP1/ASK1 of... 0.03 Archaeplastida
Solyc03g112710.1.1 No alias target protein binding component SKP1/ASK1 of... 0.03 Archaeplastida
Zm00001e011287_P001 No alias target protein binding component SKP1/ASK1 of... 0.03 Archaeplastida
Zm00001e011288_P001 No alias target protein binding component SKP1/ASK1 of... 0.03 Archaeplastida
Zm00001e020534_P002 No alias target protein binding component SKP1/ASK1 of... 0.03 Archaeplastida
Zm00001e042493_P001 No alias target protein binding component SKP1/ASK1 of... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP Neighborhood
MF GO:0004022 alcohol dehydrogenase (NAD) activity IEP Neighborhood
MF GO:0004150 dihydroneopterin aldolase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0009008 DNA-methyltransferase activity IEP Neighborhood
BP GO:0009410 response to xenobiotic stimulus IEP Neighborhood
BP GO:0009736 cytokinin-activated signaling pathway IEP Neighborhood
MF GO:0009824 AMP dimethylallyltransferase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0052622 ATP dimethylallyltransferase activity IEP Neighborhood
MF GO:0052623 ADP dimethylallyltransferase activity IEP Neighborhood
BP GO:0060688 regulation of morphogenesis of a branching structure IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1900618 regulation of shoot system morphogenesis IEP Neighborhood
BP GO:1905428 regulation of plant organ formation IEP Neighborhood
MF GO:1990135 flavonoid sulfotransferase activity IEP Neighborhood
BP GO:2000032 regulation of secondary shoot formation IEP Neighborhood
InterPro domains Description Start Stop
IPR016072 Skp1_comp_dimer 115 161
IPR016073 Skp1_comp_POZ 6 65
No external refs found!