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  5. Gb_11794

Gb_11794


Description : transcription factor (DREB)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0013670 (SeedPlants) Phylogenetic Tree(s): OG_06_0013670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_11794
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00003p00133970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00007p00268280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00010p00098700 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00069p00140780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00099p00039760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00099p00122430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00150p00091360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G78080 RAP2.4 related to AP2 4 0.04 Archaeplastida
AT3G14230 RAP2.2 related to AP2 2 0.03 Archaeplastida
GSVIVT01002195001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01006277001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01021060001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01035852001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 Archaeplastida
GSVIVT01036228001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
LOC_Os01g10370.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os02g34260.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os02g34270.1 No alias Ethylene-responsive transcription factor ERF114... 0.03 Archaeplastida
LOC_Os02g38090.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os03g15660.1 No alias Ethylene-responsive transcription factor ERF012... 0.02 Archaeplastida
LOC_Os04g46440.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os04g57340.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os05g25260.1 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_10431706g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_137148g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_18454g0020 No alias transcription factor (ERF) 0.07 Archaeplastida
MA_279315g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp4g22290.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Mp6g18650.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.05 Archaeplastida
Pp3c1_27630V3.1 No alias Integrase-type DNA-binding superfamily protein 0.06 Archaeplastida
Pp3c1_7740V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c21_13130V3.1 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
Smo92334 No alias Cell wall.cutin and suberin.biosynthesis... 0.06 Archaeplastida
Solyc01g067540.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g093550.1.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc05g050830.3.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc05g052040.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc12g008350.3.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e013927_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e025064_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e030279_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e031438_P002 No alias Ethylene-responsive transcription factor RAP2-3... 0.05 Archaeplastida
Zm00001e033965_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e038888_P001 No alias transcription factor (DREB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 25 74
No external refs found!