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  5. Gb_12262

Gb_12262


Description : Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana (sp|q9lff1|pp281_arath : 247.0)


Gene families : OG0074843 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0061356 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0054663 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12262
Cluster HCCA: Cluster_4


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 102 131
IPR002885 Pentatricopeptide_repeat 200 249
IPR002885 Pentatricopeptide_repeat 134 182
IPR002885 Pentatricopeptide_repeat 270 319
IPR002885 Pentatricopeptide_repeat 410 458
IPR002885 Pentatricopeptide_repeat 340 389
No external refs found!