Gb_12588

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0053431 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_12588
Cluster	HCCA: Cluster_162

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00089p00102760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00099p00122430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00148p00084540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.03	Archaeplastida
AT5G07580	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
GSVIVT01028315001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01028316001	No alias	No description available	0.02	Archaeplastida
Gb_02790	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_11856	No alias	Ethylene-responsive transcription factor RAP2-3...	0.03	Archaeplastida
Gb_23870	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g32040.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g51670.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g54160.2	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os03g08460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Archaeplastida
LOC_Os06g10780.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os07g47330.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10082062g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10274g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_1037g0020	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_3405g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_54341g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
MA_5530g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_5979847g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_6305g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_7166g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_912855g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_922309g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_938274g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_957g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_9786598g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp6g18650.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Pp3c10_6600V3.1	No alias	cytokinin response factor 4	0.02	Archaeplastida
Pp3c11_23290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_13260V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_13280V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c27_6030V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c5_810V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c6_19350V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc02g090800.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g093540.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc03g093610.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g051360.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g082590.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc07g053740.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc09g066360.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e000611_P001	No alias	Ethylene-responsive transcription factor ERF073...	0.03	Archaeplastida
Zm00001e003800_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e007350_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e015430_P001	No alias	Dehydration-responsive element-binding protein 1G...	0.02	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e023157_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e023748_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e026911_P005	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e034661_P001	No alias	Ethylene-responsive transcription factor ERF115...	0.03	Archaeplastida
Zm00001e038819_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e040124_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006486	protein glycosylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0043413	macromolecule glycosylation	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0070085	glycosylation	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	110	159

External Links

No external refs found!

Gb_12588

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation