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  5. Gb_12756

Gb_12756


Description : component psRPL18 of large ribosomal subunit proteome


Gene families : OG0002601 (Archaeplastida) Phylogenetic Tree(s): OG0002601_tree ,
OG_05_0005445 (LandPlants) Phylogenetic Tree(s): OG_05_0005445_tree ,
OG_06_0007992 (SeedPlants) Phylogenetic Tree(s): OG_06_0007992_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12756
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00209880 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.08 Archaeplastida
AT1G48350 No alias Ribosomal L18p/L5e family protein 0.14 Archaeplastida
Cre01.g052100 No alias Protein biosynthesis.organelle translation... 0.14 Archaeplastida
GSVIVT01017720001 No alias Protein biosynthesis.organelle translation... 0.09 Archaeplastida
LOC_Os03g61260.1 No alias component psRPL18 of large ribosomal subunit proteome 0.12 Archaeplastida
MA_7609850g0010 No alias 50S ribosomal protein L18, chloroplastic OS=Arabidopsis... 0.13 Archaeplastida
Mp6g08500.1 No alias component psRPL18 of large ribosomal subunit proteome 0.18 Archaeplastida
Pp3c11_5070V3.1 No alias Ribosomal L18p/L5e family protein 0.13 Archaeplastida
Pp3c1_1240V3.1 No alias Ribosomal L18p/L5e family protein 0.01 Archaeplastida
Pp3c7_24650V3.1 No alias Ribosomal L18p/L5e family protein 0.15 Archaeplastida
Smo143891 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Solyc12g098890.2.1 No alias component psRPL18 of large ribosomal subunit proteome 0.14 Archaeplastida
Zm00001e006246_P001 No alias component psRPL18 of large ribosomal subunit proteome 0.17 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004418 hydroxymethylbilane synthase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015995 chlorophyll biosynthetic process IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 57 175
No external refs found!