1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_13078

Gb_13078


Description : Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana (sp|q9c7a2|itn1_arath : 234.0)


Gene families : OG0000647 (Archaeplastida) Phylogenetic Tree(s): OG0000647_tree ,
OG_05_0000409 (LandPlants) Phylogenetic Tree(s): OG_05_0000409_tree ,
OG_06_0012903 (SeedPlants) Phylogenetic Tree(s): OG_06_0012903_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13078
Cluster HCCA: Cluster_316

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00071480 evm_27.TU.AmTr_v1... Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00088p00076560 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G10340 No alias Ankyrin repeat family protein 0.07 Archaeplastida
AT2G24600 No alias Ankyrin repeat family protein 0.07 Archaeplastida
AT3G12360 ITN1 Ankyrin repeat family protein 0.03 Archaeplastida
AT5G54700 No alias Ankyrin repeat family protein 0.03 Archaeplastida
AT5G54710 No alias Ankyrin repeat family protein 0.04 Archaeplastida
AT5G54720 No alias Ankyrin repeat family protein 0.04 Archaeplastida
GSVIVT01025591001 No alias Ankyrin repeat-containing protein At5g02620... 0.03 Archaeplastida
GSVIVT01025592001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01035638001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os01g61990.2 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os03g17250.1 No alias Ankyrin repeat-containing protein At5g02620... 0.03 Archaeplastida
MA_10427678g0010 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g054830.3.1 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.07 Archaeplastida
Solyc08g014570.3.1 No alias Ankyrin repeat-containing protein At5g02620... 0.05 Archaeplastida
Solyc08g066770.3.1 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.07 Archaeplastida
Solyc09g005860.3.1 No alias Ankyrin repeat-containing protein At5g02620... 0.03 Archaeplastida
Zm00001e001261_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e001262_P002 No alias Ankyrin repeat-containing protein At5g02620... 0.02 Archaeplastida
Zm00001e010178_P002 No alias Ankyrin repeat-containing protein At5g02620... 0.03 Archaeplastida
Zm00001e019361_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038455_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 109 198
IPR020683 Ankyrin_rpt-contain_dom 240 306
IPR020683 Ankyrin_rpt-contain_dom 6 96
IPR026961 PGG_dom 394 504
No external refs found!