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  5. Gb_13713

Gb_13713


Description : Alpha-bisabolene synthase OS=Abies grandis (sp|o81086|tpsd1_abigr : 352.0)


Gene families : OG0002410 (Archaeplastida) Phylogenetic Tree(s): OG0002410_tree ,
OG_05_0001597 (LandPlants) Phylogenetic Tree(s): OG_05_0001597_tree ,
OG_06_0000711 (SeedPlants) Phylogenetic Tree(s): OG_06_0000711_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13713
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00256250 evm_27.TU.AmTr_v1... Santalene and bergamotene synthase, chloroplastic... 0.03 Archaeplastida
AMTR_s00003p00256260 evm_27.TU.AmTr_v1... (13E)-labda-7,13-dien-15-ol synthase OS=Selaginella... 0.02 Archaeplastida
Gb_38471 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.03 Archaeplastida
MA_152325g0010 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.03 Archaeplastida
MA_34273g0020 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.04 Archaeplastida
MA_7940170g0010 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.06 Archaeplastida
Solyc08g005635.1.1 No alias Beta-phellandrene synthase... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 229 319
No external refs found!