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  5. Gb_13769

Gb_13769


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 262.0)


Gene families : OG0001067 (Archaeplastida) Phylogenetic Tree(s): OG0001067_tree ,
OG_05_0000560 (LandPlants) Phylogenetic Tree(s): OG_05_0000560_tree ,
OG_06_0002319 (SeedPlants) Phylogenetic Tree(s): OG_06_0002319_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13769
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Gb_02590 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_21739 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 Archaeplastida
Gb_22123 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_30852 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_32696 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_37369 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_40037 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 Archaeplastida
Pp3c13_21660V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.01 Archaeplastida
Solyc02g032035.1.1 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Solyc07g055573.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc10g049415.1.1 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!