Gb_13769


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 262.0)


Gene families : OG0001067 (Archaeplastida) Phylogenetic Tree(s): OG0001067_tree ,
OG_05_0000560 (LandPlants) Phylogenetic Tree(s): OG_05_0000560_tree ,
OG_06_0002319 (SeedPlants) Phylogenetic Tree(s): OG_06_0002319_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13769
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Gb_02590 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_21739 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 Archaeplastida
Gb_22123 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_30852 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_32696 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_37369 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_40037 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 Archaeplastida
Pp3c13_21660V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.01 Archaeplastida
Solyc02g032035.1.1 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Solyc07g055573.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc10g049415.1.1 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!