AT2G28350 (ARF10)


Aliases : ARF10

Description : auxin response factor 10


Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0001322 (LandPlants) Phylogenetic Tree(s): OG_05_0001322_tree ,
OG_06_0001040 (SeedPlants) Phylogenetic Tree(s): OG_06_0001040_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G28350
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01021128001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
GSVIVT01035204001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
MA_2237g0020 No alias transcription factor (ARF) 0.04 Archaeplastida
Smo437944 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
Solyc03g118290.3.1 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e003229_P002 No alias transcription factor (ARF) 0.02 Archaeplastida
Zm00001e006577_P003 No alias transcription factor (ARF) 0.02 Archaeplastida
Zm00001e018126_P002 No alias transcription factor (ARF) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
BP GO:0007389 pattern specification process IDA Interproscan
BP GO:0009734 auxin-activated signaling pathway IMP Interproscan
BP GO:0009738 abscisic acid-activated signaling pathway IMP Interproscan
BP GO:0009743 response to carbohydrate IMP Interproscan
BP GO:0010154 fruit development IMP Interproscan
BP GO:0031540 regulation of anthocyanin biosynthetic process IMP Interproscan
MF GO:0035198 miRNA binding ISS Interproscan
BP GO:0048366 leaf development IMP Interproscan
BP GO:0048441 petal development IMP Interproscan
BP GO:0048442 sepal development IMP Interproscan
BP GO:0048589 developmental growth IMP Interproscan
BP GO:0048829 root cap development IMP Interproscan
BP GO:0048829 root cap development IGI Interproscan
BP GO:0051301 cell division IGI Interproscan
Type GO Term Name Evidence Source
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP Neighborhood
BP GO:0009744 response to sucrose IEP Neighborhood
BP GO:0009812 flavonoid metabolic process IEP Neighborhood
BP GO:0009813 flavonoid biosynthetic process IEP Neighborhood
BP GO:0010053 root epidermal cell differentiation IEP Neighborhood
BP GO:0010054 trichoblast differentiation IEP Neighborhood
BP GO:0010224 response to UV-B IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0034285 response to disaccharide IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046283 anthocyanin-containing compound metabolic process IEP Neighborhood
BP GO:0090627 plant epidermal cell differentiation IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 115 216
IPR010525 Auxin_resp 278 360
No external refs found!