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  5. Gb_14060

Gb_14060


Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana (sp|p31843|rrpo_oenbe : 144.0)


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000372 (LandPlants) Phylogenetic Tree(s): OG_05_0000372_tree ,
OG_06_0000167 (SeedPlants) Phylogenetic Tree(s): OG_06_0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_14060
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
Cre01.g006402 No alias No description available 0.02 Archaeplastida
Gb_02517 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_03156 No alias Uncharacterized mitochondrial protein AtMg00860... 0.06 Archaeplastida
Gb_03956 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_03978 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_05404 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_07009 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_09706 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_10780 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
Gb_15436 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Gb_18694 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_18747 No alias Uncharacterized mitochondrial protein AtMg00860... 0.07 Archaeplastida
Gb_20044 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_21092 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_21108 No alias Uncharacterized mitochondrial protein AtMg00860... 0.03 Archaeplastida
Gb_23759 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_24142 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_30072 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_30475 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_32815 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_33106 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Gb_38708 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
Gb_40215 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Pp3c3_35120V3.1 No alias No annotation 0.03 Archaeplastida
Solyc08g041685.1.1 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!