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  5. AT2G28630

AT2G28630 (KCS12)


Aliases : KCS12

Description : 3-ketoacyl-CoA synthase 12


Gene families : OG0000123 (Archaeplastida) Phylogenetic Tree(s): OG0000123_tree ,
OG_05_0004454 (LandPlants) Phylogenetic Tree(s): OG_05_0004454_tree ,
OG_06_0002864 (SeedPlants) Phylogenetic Tree(s): OG_06_0002864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G28630
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00267760 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 Archaeplastida
AMTR_s00018p00245180 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 Archaeplastida
AMTR_s00079p00192440 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
GSVIVT01025052001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.07 Archaeplastida
Gb_15941 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
MA_10433600g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Pp3c1_37250V3.1 No alias 3-ketoacyl-CoA synthase 4 0.02 Archaeplastida
Smo231244 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
Solyc02g063140.4.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.08 Archaeplastida
Solyc02g085870.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Solyc03g005320.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Solyc06g053870.4.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 Archaeplastida
Solyc11g072990.1.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Zm00001e000593_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 Archaeplastida
Zm00001e037353_P002 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
MF GO:0016746 transferase activity, transferring acyl groups ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP Neighborhood
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005275 amine transmembrane transporter activity IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006566 threonine metabolic process IEP Neighborhood
BP GO:0006567 threonine catabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009068 aspartate family amino acid catabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0009106 lipoate metabolic process IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
BP GO:0009838 abscission IEP Neighborhood
BP GO:0009958 positive gravitropism IEP Neighborhood
BP GO:0010025 wax biosynthetic process IEP Neighborhood
BP GO:0010093 specification of floral organ identity IEP Neighborhood
BP GO:0010166 wax metabolic process IEP Neighborhood
BP GO:0010227 floral organ abscission IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0015112 nitrate transmembrane transporter activity IEP Neighborhood
MF GO:0015171 amino acid transmembrane transporter activity IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0016098 monoterpenoid metabolic process IEP Neighborhood
BP GO:0016099 monoterpenoid biosynthetic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0019216 regulation of lipid metabolic process IEP Neighborhood
BP GO:0022622 root system development IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0031407 oxylipin metabolic process IEP Neighborhood
BP GO:0031408 oxylipin biosynthetic process IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
MF GO:0034768 (E)-beta-ocimene synthase activity IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
BP GO:0042335 cuticle development IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0048507 meristem development IEP Neighborhood
MF GO:0050551 myrcene synthase activity IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
BP GO:0080027 response to herbivore IEP Neighborhood
MF GO:0080054 low-affinity nitrate transmembrane transporter activity IEP Neighborhood
BP GO:0090701 specification of plant organ identity IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901568 fatty acid derivative metabolic process IEP Neighborhood
BP GO:1901570 fatty acid derivative biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
BP GO:2000012 regulation of auxin polar transport IEP Neighborhood
InterPro domains Description Start Stop
IPR013747 ACP_syn_III_C 341 423
IPR013601 FAE1_typ3_polyketide_synth 25 312
No external refs found!