Gb_14466


Description : Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana (sp|q0wvv0|ppr31_arath : 570.0)


Gene families : OG0008582 (Archaeplastida) Phylogenetic Tree(s): OG0008582_tree ,
OG_05_0007894 (LandPlants) Phylogenetic Tree(s): OG_05_0007894_tree ,
OG_06_0007781 (SeedPlants) Phylogenetic Tree(s): OG_06_0007781_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_14466
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
MA_92401g0010 No alias Pentatricopeptide repeat-containing protein At1g10910,... 0.06 Archaeplastida
Solyc11g040260.2.1 No alias Pentatricopeptide repeat-containing protein At1g10910,... 0.03 Archaeplastida
Zm00001e020710_P002 No alias Pentatricopeptide repeat-containing protein At1g10910,... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 246 274
IPR002885 Pentatricopeptide_repeat 491 517
IPR002885 Pentatricopeptide_repeat 211 238
IPR002885 Pentatricopeptide_repeat 449 480
IPR002885 Pentatricopeptide_repeat 523 570
IPR033443 PPR_long 289 436
No external refs found!