AT2G28810

Description : Dof-type zinc finger DNA-binding family protein

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0024993 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G28810
Cluster	HCCA: Cluster_202

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00080p00087770	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00160p00046100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.03	Archaeplastida
AT5G60850	OBP4	OBF binding protein 4	0.04	Archaeplastida
GSVIVT01016538001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.06	Archaeplastida
GSVIVT01021086001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
GSVIVT01024986001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
Gb_12877	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os02g47810.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os03g07360.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
LOC_Os03g16850.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os03g38870.1	No alias	transcription factor (DOF)	0.07	Archaeplastida
LOC_Os03g60630.1	No alias	transcription factor (DOF)	0.11	Archaeplastida
LOC_Os05g02150.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os05g36900.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os07g13260.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os07g32510.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_46520g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
Mp2g20790.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Pp3c13_2000V3.1	No alias	cycling DOF factor 3	0.04	Archaeplastida
Pp3c6_13360V3.1	No alias	cycling DOF factor 3	0.03	Archaeplastida
Pp3c9_4910V3.1	No alias	cycling DOF factor 2	0.03	Archaeplastida
Solyc02g076850.2.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc03g112930.3.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
Solyc05g054510.2.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc06g071480.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc06g150130.1.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc08g082910.2.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc09g010680.3.1	No alias	transcription factor (DOF)	0.09	Archaeplastida
Solyc10g086440.2.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
Solyc11g066050.1.1	No alias	transcription factor (DOF)	0.07	Archaeplastida
Zm00001e003414_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e005785_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e006190_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e006527_P001	No alias	transcription factor (DOF)	0.07	Archaeplastida
Zm00001e007228_P002	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e011750_P002	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e012437_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e015414_P004	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e015701_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e019172_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e023218_P004	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e023435_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e027411_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e027634_P002	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e038479_P002	No alias	transcription factor (DOF)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	IEP	Neighborhood
BP	GO:0000578	embryonic axis specification	IEP	Neighborhood
MF	GO:0001067	regulatory region nucleic acid binding	IEP	Neighborhood
BP	GO:0002682	regulation of immune system process	IEP	Neighborhood
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
MF	GO:0004520	endodeoxyribonuclease activity	IEP	Neighborhood
MF	GO:0004521	endoribonuclease activity	IEP	Neighborhood
MF	GO:0004536	deoxyribonuclease activity	IEP	Neighborhood
CC	GO:0005851	eukaryotic translation initiation factor 2B complex	IEP	Neighborhood
CC	GO:0005911	cell-cell junction	IEP	Neighborhood
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006308	DNA catabolic process	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
BP	GO:0006612	protein targeting to membrane	IEP	Neighborhood
BP	GO:0007389	pattern specification process	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
BP	GO:0008361	regulation of cell size	IEP	Neighborhood
CC	GO:0009506	plasmodesma	IEP	Neighborhood
BP	GO:0009625	response to insect	IEP	Neighborhood
MF	GO:0009672	auxin:proton symporter activity	IEP	Neighborhood
BP	GO:0009798	axis specification	IEP	Neighborhood
BP	GO:0009880	embryonic pattern specification	IEP	Neighborhood
BP	GO:0009942	longitudinal axis specification	IEP	Neighborhood
BP	GO:0010039	response to iron ion	IEP	Neighborhood
MF	GO:0010329	auxin efflux transmembrane transporter activity	IEP	Neighborhood
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	Neighborhood
BP	GO:0010439	regulation of glucosinolate biosynthetic process	IEP	Neighborhood
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0010941	regulation of cell death	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015562	efflux transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Neighborhood
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Neighborhood
BP	GO:0019509	L-methionine salvage from methylthioadenosine	IEP	Neighborhood
CC	GO:0030054	cell junction	IEP	Neighborhood
BP	GO:0032870	cellular response to hormone stimulus	IEP	Neighborhood
BP	GO:0032881	regulation of polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0034599	cellular response to oxidative stress	IEP	Neighborhood
BP	GO:0034614	cellular response to reactive oxygen species	IEP	Neighborhood
BP	GO:0035690	cellular response to drug	IEP	Neighborhood
BP	GO:0042493	response to drug	IEP	Neighborhood
BP	GO:0042762	regulation of sulfur metabolic process	IEP	Neighborhood
BP	GO:0043067	regulation of programmed cell death	IEP	Neighborhood
BP	GO:0043102	amino acid salvage	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0043455	regulation of secondary metabolic process	IEP	Neighborhood
MF	GO:0043621	protein self-association	IEP	Neighborhood
MF	GO:0044212	transcription regulatory region DNA binding	IEP	Neighborhood
BP	GO:0045088	regulation of innate immune response	IEP	Neighborhood
MF	GO:0046523	S-methyl-5-thioribose-1-phosphate isomerase activity	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0046982	protein heterodimerization activity	IEP	Neighborhood
BP	GO:0050776	regulation of immune response	IEP	Neighborhood
BP	GO:0062012	regulation of small molecule metabolic process	IEP	Neighborhood
BP	GO:0071241	cellular response to inorganic substance	IEP	Neighborhood
BP	GO:0071248	cellular response to metal ion	IEP	Neighborhood
BP	GO:0071265	L-methionine biosynthetic process	IEP	Neighborhood
BP	GO:0071267	L-methionine salvage	IEP	Neighborhood
BP	GO:0071281	cellular response to iron ion	IEP	Neighborhood
BP	GO:0071369	cellular response to ethylene stimulus	IEP	Neighborhood
BP	GO:0071495	cellular response to endogenous stimulus	IEP	Neighborhood
BP	GO:0071731	response to nitric oxide	IEP	Neighborhood
BP	GO:0071732	cellular response to nitric oxide	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
BP	GO:0080135	regulation of cellular response to stress	IEP	Neighborhood
MF	GO:0080161	auxin transmembrane transporter activity	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood
BP	GO:0097366	response to bronchodilator	IEP	Neighborhood
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:1901699	cellular response to nitrogen compound	IEP	Neighborhood
BP	GO:1902170	cellular response to reactive nitrogen species	IEP	Neighborhood
BP	GO:2000904	regulation of starch metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	93	148

External Links

No external refs found!

AT2G28810

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation