AT2G28810


Description : Dof-type zinc finger DNA-binding family protein


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0024993 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G28810
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00080p00087770 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00160p00046100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.03 Archaeplastida
AT5G60850 OBP4 OBF binding protein 4 0.04 Archaeplastida
GSVIVT01016538001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01024986001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
Gb_12877 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os02g47810.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os03g07360.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os03g16850.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g38870.1 No alias transcription factor (DOF) 0.07 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.11 Archaeplastida
LOC_Os05g02150.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os05g36900.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os07g13260.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_46520g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Pp3c13_2000V3.1 No alias cycling DOF factor 3 0.04 Archaeplastida
Pp3c6_13360V3.1 No alias cycling DOF factor 3 0.03 Archaeplastida
Pp3c9_4910V3.1 No alias cycling DOF factor 2 0.03 Archaeplastida
Solyc02g076850.2.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc05g054510.2.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc06g071480.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc06g150130.1.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc08g082910.2.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.09 Archaeplastida
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc11g066050.1.1 No alias transcription factor (DOF) 0.07 Archaeplastida
Zm00001e003414_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e005785_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e006190_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e006527_P001 No alias transcription factor (DOF) 0.07 Archaeplastida
Zm00001e007228_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e011750_P002 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e012437_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e015701_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e019172_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e023435_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e027411_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e027634_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e038479_P002 No alias transcription factor (DOF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP Neighborhood
BP GO:0000578 embryonic axis specification IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
BP GO:0002682 regulation of immune system process IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004520 endodeoxyribonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0006109 regulation of carbohydrate metabolic process IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0008361 regulation of cell size IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
BP GO:0009625 response to insect IEP Neighborhood
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
BP GO:0009798 axis specification IEP Neighborhood
BP GO:0009880 embryonic pattern specification IEP Neighborhood
BP GO:0009942 longitudinal axis specification IEP Neighborhood
BP GO:0010039 response to iron ion IEP Neighborhood
MF GO:0010329 auxin efflux transmembrane transporter activity IEP Neighborhood
BP GO:0010363 regulation of plant-type hypersensitive response IEP Neighborhood
BP GO:0010439 regulation of glucosinolate biosynthetic process IEP Neighborhood
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0010941 regulation of cell death IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015562 efflux transmembrane transporter activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
BP GO:0019509 L-methionine salvage from methylthioadenosine IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
BP GO:0032870 cellular response to hormone stimulus IEP Neighborhood
BP GO:0032881 regulation of polysaccharide metabolic process IEP Neighborhood
BP GO:0034599 cellular response to oxidative stress IEP Neighborhood
BP GO:0034614 cellular response to reactive oxygen species IEP Neighborhood
BP GO:0035690 cellular response to drug IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042762 regulation of sulfur metabolic process IEP Neighborhood
BP GO:0043067 regulation of programmed cell death IEP Neighborhood
BP GO:0043102 amino acid salvage IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP Neighborhood
BP GO:0043455 regulation of secondary metabolic process IEP Neighborhood
MF GO:0043621 protein self-association IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
MF GO:0046523 S-methyl-5-thioribose-1-phosphate isomerase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046982 protein heterodimerization activity IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0062012 regulation of small molecule metabolic process IEP Neighborhood
BP GO:0071241 cellular response to inorganic substance IEP Neighborhood
BP GO:0071248 cellular response to metal ion IEP Neighborhood
BP GO:0071265 L-methionine biosynthetic process IEP Neighborhood
BP GO:0071267 L-methionine salvage IEP Neighborhood
BP GO:0071281 cellular response to iron ion IEP Neighborhood
BP GO:0071369 cellular response to ethylene stimulus IEP Neighborhood
BP GO:0071495 cellular response to endogenous stimulus IEP Neighborhood
BP GO:0071731 response to nitric oxide IEP Neighborhood
BP GO:0071732 cellular response to nitric oxide IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
MF GO:0080161 auxin transmembrane transporter activity IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0097366 response to bronchodilator IEP Neighborhood
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP Neighborhood
BP GO:1901699 cellular response to nitrogen compound IEP Neighborhood
BP GO:1902170 cellular response to reactive nitrogen species IEP Neighborhood
BP GO:2000904 regulation of starch metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 93 148
No external refs found!