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  5. Gb_15410

Gb_15410


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 163.0)


Gene families : OG0000390 (Archaeplastida) Phylogenetic Tree(s): OG0000390_tree ,
OG_05_0000129 (LandPlants) Phylogenetic Tree(s): OG_05_0000129_tree ,
OG_06_0000040 (SeedPlants) Phylogenetic Tree(s): OG_06_0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15410
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
Gb_03950 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_04117 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.11 Archaeplastida
Gb_05692 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_07759 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Gb_08424 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_11892 No alias no hits & (original description: none) 0.14 Archaeplastida
Gb_13767 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.12 Archaeplastida
Gb_14265 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Gb_16634 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_16945 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_20537 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_21087 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_26083 No alias no hits & (original description: none) 0.1 Archaeplastida
Gb_29642 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Gb_30022 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.09 Archaeplastida
Gb_31730 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_32814 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.17 Archaeplastida
Gb_32952 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_33568 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 Archaeplastida
Gb_35456 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_41307 No alias no hits & (original description: none) 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEP Neighborhood
InterPro domains Description Start Stop
IPR013103 RVT_2 10 90
No external refs found!