1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G29900

AT2G29900 (PS2)


Aliases : PS2

Description : Presenilin-2


Gene families : OG0002394 (Archaeplastida) Phylogenetic Tree(s): OG0002394_tree ,
OG_05_0002530 (LandPlants) Phylogenetic Tree(s): OG_05_0002530_tree ,
OG_06_0001681 (SeedPlants) Phylogenetic Tree(s): OG_06_0001681_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G29900
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
Gb_33523 No alias catalytic component PS of gamma secretase complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IBA Interproscan
CC GO:0005887 integral component of plasma membrane IBA Interproscan
BP GO:0008152 metabolic process IBA Interproscan
CC GO:0016020 membrane ISS Interproscan
BP GO:0035556 intracellular signal transduction ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000255 allantoin metabolic process IEP Neighborhood
BP GO:0000256 allantoin catabolic process IEP Neighborhood
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Neighborhood
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0004564 beta-fructofuranosidase activity IEP Neighborhood
MF GO:0004848 ureidoglycolate hydrolase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0006144 purine nucleobase metabolic process IEP Neighborhood
BP GO:0006145 purine nucleobase catabolic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006366 transcription by RNA polymerase II IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007020 microtubule nucleation IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009846 pollen germination IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009958 positive gravitropism IEP Neighborhood
BP GO:0010050 vegetative phase change IEP Neighborhood
BP GO:0010073 meristem maintenance IEP Neighborhood
BP GO:0010135 ureide metabolic process IEP Neighborhood
BP GO:0010136 ureide catabolic process IEP Neighborhood
BP GO:0010154 fruit development IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0031965 nuclear membrane IEP Neighborhood
MF GO:0032182 ubiquitin-like protein binding IEP Neighborhood
MF GO:0043130 ubiquitin binding IEP Neighborhood
BP GO:0043605 cellular amide catabolic process IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046113 nucleobase catabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0060688 regulation of morphogenesis of a branching structure IEP Neighborhood
BP GO:0072523 purine-containing compound catabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:1900618 regulation of shoot system morphogenesis IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
BP GO:1905428 regulation of plant organ formation IEP Neighborhood
BP GO:2000032 regulation of secondary shoot formation IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001108 Peptidase_A22A 16 387
No external refs found!