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  5. Gb_16521

Gb_16521


Description : F-box/kelch-repeat protein At5g42350 OS=Arabidopsis thaliana (sp|q9fii2|fk117_arath : 430.0)


Gene families : OG0007939 (Archaeplastida) Phylogenetic Tree(s): OG0007939_tree ,
OG_05_0006314 (LandPlants) Phylogenetic Tree(s): OG_05_0006314_tree ,
OG_06_0007576 (SeedPlants) Phylogenetic Tree(s): OG_06_0007576_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16521
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g38300.1 No alias F-box/kelch-repeat protein At5g42350 OS=Arabidopsis... 0.04 Archaeplastida
MA_6738g0020 No alias F-box/kelch-repeat protein At5g42360 OS=Arabidopsis... 0.04 Archaeplastida
Mp1g29160.1 No alias F-box/kelch-repeat protein At5g42360 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0001012 RNA polymerase II regulatory region DNA binding IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0032422 purine-rich negative regulatory element binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 255 289
IPR006652 Kelch_1 343 398
IPR006652 Kelch_1 539 569
No external refs found!