Gb_16695


Description : component RPL5 of LSU proteome component


Gene families : OG0002752 (Archaeplastida) Phylogenetic Tree(s): OG0002752_tree ,
OG_05_0002866 (LandPlants) Phylogenetic Tree(s): OG_05_0002866_tree ,
OG_06_0003201 (SeedPlants) Phylogenetic Tree(s): OG_06_0003201_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16695
Cluster HCCA: Cluster_335

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00162800 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
AT3G25520 OLI5, RPL5A, PGY3, ATL5 ribosomal protein L5 0.15 Archaeplastida
AT5G39740 OLI7, RPL5B ribosomal protein L5 B 0.14 Archaeplastida
Cpa|evm.model.tig00000194.49 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
Cre14.g621450 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
GSVIVT01038188001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
LOC_Os01g67134.1 No alias component RPL5 of LSU proteome component 0.11 Archaeplastida
MA_70965g0010 No alias component RPL5 of LSU proteome component 0.1 Archaeplastida
Mp4g15800.1 No alias component RPL5 of LSU proteome component 0.14 Archaeplastida
Pp3c11_6420V3.1 No alias ribosomal protein L5 B 0.14 Archaeplastida
Pp3c1_7160V3.1 No alias ribosomal protein L5 B 0.07 Archaeplastida
Pp3c2_31540V3.1 No alias ribosomal protein L5 B 0.05 Archaeplastida
Pp3c7_25660V3.1 No alias ribosomal protein L5 B 0.12 Archaeplastida
Smo144921 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
Solyc06g007670.4.1 No alias component RPL5 of LSU proteome component 0.17 Archaeplastida
Solyc06g082870.4.1 No alias component RPL5 of LSU proteome component 0.09 Archaeplastida
Solyc09g020130.3.1 No alias component RPL5 of LSU proteome component 0.11 Archaeplastida
Zm00001e000256_P001 No alias component RPL5 of LSU proteome component 0.06 Archaeplastida
Zm00001e018972_P001 No alias component RPL5 of LSU proteome component 0.03 Archaeplastida
Zm00001e028563_P004 No alias component RPL5 of LSU proteome component 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0008097 5S rRNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025607 Rbsml_L5e/L18P_C 228 302
IPR005485 Rbsml_L5_euk/L18_arc 14 175
No external refs found!