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  5. Gb_16720

Gb_16720


Description : component RPL18 of LSU proteome component


Gene families : OG0001941 (Archaeplastida) Phylogenetic Tree(s): OG0001941_tree ,
OG_05_0001876 (LandPlants) Phylogenetic Tree(s): OG_05_0001876_tree ,
OG_06_0001935 (SeedPlants) Phylogenetic Tree(s): OG_06_0001935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16720
Cluster HCCA: Cluster_335

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000142.18 No alias 60S ribosomal protein L18 (Fragment) OS=Cicer arietinum 0.03 Archaeplastida
Cre12.g512600 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
GSVIVT01031168001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
GSVIVT01035120001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
LOC_Os03g22180.1 No alias component RPL18 of LSU proteome component 0.03 Archaeplastida
LOC_Os05g06310.1 No alias component RPL18 of LSU proteome component 0.03 Archaeplastida
LOC_Os07g47780.1 No alias component RPL18 of LSU proteome component 0.02 Archaeplastida
Mp1g22500.1 No alias component RPL18 of LSU proteome component 0.02 Archaeplastida
Pp3c1_3480V3.1 No alias ribosomal protein L18 0.02 Archaeplastida
Pp3c1_5330V3.1 No alias ribosomal protein L18 0.02 Archaeplastida
Pp3c2_32510V3.1 No alias ribosomal protein L18 0.03 Archaeplastida
Pp3c2_34080V3.1 No alias ribosomal protein L18 0.02 Archaeplastida
Pp3c7_22030V3.1 No alias ribosomal protein L18 0.01 Archaeplastida
Smo267976 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Solyc01g099900.4.1 No alias component RPL18 of LSU proteome component 0.03 Archaeplastida
Zm00001e026750_P001 No alias component RPL18 of LSU proteome component 0.03 Archaeplastida
Zm00001e031155_P001 No alias component RPL18 of LSU proteome component 0.03 Archaeplastida
Zm00001e035836_P001 No alias component RPL18 of LSU proteome component 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 126 262
No external refs found!