Gb_16900

Description : SNF1-related protein kinase (SnRK3)

Gene families : OG0000072 (Archaeplastida) Phylogenetic Tree(s): OG0000072_tree ,
OG_05_0000211 (LandPlants) Phylogenetic Tree(s): OG_05_0000211_tree ,
OG_06_0000077 (SeedPlants) Phylogenetic Tree(s): OG_06_0000077_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_16900
Cluster	HCCA: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00198230	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.CAMK kinase...	0.03	Archaeplastida
AMTR_s00045p00096970	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.CAMK kinase...	0.04	Archaeplastida
AMTR_s00130p00110630	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.CAMK kinase...	0.02	Archaeplastida
AT2G30360	PKS5, SNRK3.22,...	SOS3-interacting protein 4	0.04	Archaeplastida
AT4G18700	WL4, SnRK3.9,...	CBL-interacting protein kinase 12	0.03	Archaeplastida
AT4G24400	ATCIPK8, CIPK8,...	CBL-interacting protein kinase 8	0.03	Archaeplastida
AT5G45810	CIPK19, SnRK3.5	CBL-interacting protein kinase 19	0.02	Archaeplastida
Cpa\|evm.model.tig00021352.37	No alias	CBL-interacting serine/threonine-protein kinase 9...	0.01	Archaeplastida
GSVIVT01009228001	No alias	External stimuli response.salinity.SOS (Salt Overly...	0.02	Archaeplastida
GSVIVT01021231001	No alias	Protein modification.phosphorylation.CAMK kinase...	0.04	Archaeplastida
LOC_Os01g10890.1	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
LOC_Os01g55440.1	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
LOC_Os05g11790.1	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
LOC_Os06g40370.1	No alias	SNF1-related protein kinase (SnRK3). protein kinase (SOS2)	0.03	Archaeplastida
LOC_Os07g05620.1	No alias	SNF1-related protein kinase (SnRK3)	0.05	Archaeplastida
LOC_Os08g19410.1	No alias	CBL-interacting protein kinase 25 OS=Oryza sativa subsp....	0.03	Archaeplastida
MA_134411g0010	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
MA_31203g0010	No alias	SNF1-related protein kinase (SnRK3)	0.04	Archaeplastida
MA_836682g0010	No alias	SNF1-related protein kinase (SnRK3)	0.05	Archaeplastida
Solyc03g006110.3.1	No alias	No annotation	0.03	Archaeplastida
Solyc09g018280.1.1	No alias	SNF1-related protein kinase (SnRK3)	0.04	Archaeplastida
Solyc12g098910.2.1	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
Zm00001e029014_P003	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
Zm00001e030580_P001	No alias	SNF1-related protein kinase (SnRK3). protein kinase (SOS2)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
MF	GO:0051287	NAD binding	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	18	272
IPR004041	NAF_dom	311	370

External Links

No external refs found!

Gb_16900

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation