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  5. Gb_17067

Gb_17067


Description : component RPS14 of SSU proteome


Gene families : OG0002067 (Archaeplastida) Phylogenetic Tree(s): OG0002067_tree ,
OG_05_0002738 (LandPlants) Phylogenetic Tree(s): OG_05_0002738_tree ,
OG_06_0002374 (SeedPlants) Phylogenetic Tree(s): OG_06_0002374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17067
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00104960 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
AT2G36160 No alias Ribosomal protein S11 family protein 0.14 Archaeplastida
AT3G11510 No alias Ribosomal protein S11 family protein 0.09 Archaeplastida
AT3G52580 No alias Ribosomal protein S11 family protein 0.15 Archaeplastida
Cpa|evm.model.tig00001154.44 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
Cre11.g480150 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
GSVIVT01033877001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 Archaeplastida
GSVIVT01036096001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
LOC_Os02g06700.1 No alias component RPS14 of SSU proteome 0.04 Archaeplastida
LOC_Os02g33140.1 No alias component RPS14 of SSU proteome 0.13 Archaeplastida
MA_113075g0010 No alias component RPS14 of SSU proteome 0.03 Archaeplastida
Mp8g03250.1 No alias component RPS14 of SSU proteome 0.13 Archaeplastida
Mp8g10900.1 No alias component RPS14 of SSU proteome 0.13 Archaeplastida
Pp3c15_22240V3.1 No alias Ribosomal protein S11 family protein 0.14 Archaeplastida
Pp3c9_21480V3.1 No alias Ribosomal protein S11 family protein 0.05 Archaeplastida
Smo183051 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
Solyc02g070570.4.1 No alias component RPS14 of SSU proteome 0.04 Archaeplastida
Solyc09g010100.3.1 No alias component RPS14 of SSU proteome 0.1 Archaeplastida
Solyc10g083280.4.1 No alias component RPS14 of SSU proteome 0.12 Archaeplastida
Zm00001e022659_P002 No alias component RPS14 of SSU proteome 0.07 Archaeplastida
Zm00001e030302_P001 No alias component RPS14 of SSU proteome 0.12 Archaeplastida
Zm00001e030303_P001 No alias component RPS14 of SSU proteome 0.06 Archaeplastida
Zm00001e037468_P002 No alias component RPS14 of SSU proteome 0.16 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001971 Ribosomal_S11 42 173
No external refs found!