1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_17208

Gb_17208


Description : transcription factor (DREB). C2H2 zinc finger transcription factor


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0014266 (SeedPlants) Phylogenetic Tree(s): OG_06_0014266_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17208
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00232330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00023p00044590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00051p00204250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00069p00140780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00115p00032780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00148p00084540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G36060 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.03 Archaeplastida
AT3G20310 ERF7, ATERF7, ATERF-7 ethylene response factor 7 0.04 Archaeplastida
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.03 Archaeplastida
GSVIVT01013917001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013923001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013935001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01014291001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01015037001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01019519001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01019860001 No alias External stimuli response.temperature.ICE-CBF cold... 0.04 Archaeplastida
GSVIVT01027770001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01031747001 No alias Alpha-amylase type B isozyme OS=Hordeum vulgare 0.04 Archaeplastida
GSVIVT01035502001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 Archaeplastida
GSVIVT01036388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_06408 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_11856 No alias Ethylene-responsive transcription factor RAP2-3... 0.02 Archaeplastida
Gb_24326 No alias transcription factor (DREB) 0.05 Archaeplastida
Gb_24328 No alias transcription factor (DREB) 0.06 Archaeplastida
Gb_24329 No alias transcription factor (DREB) 0.05 Archaeplastida
Gb_24891 No alias transcription factor (ERF) 0.05 Archaeplastida
Gb_26856 No alias transcription factor (DREB) 0.05 Archaeplastida
Gb_26857 No alias transcription factor (DREB) 0.05 Archaeplastida
Gb_26863 No alias transcription factor (DREB) 0.05 Archaeplastida
Gb_32532 No alias transcription factor (ERF) 0.05 Archaeplastida
Gb_32995 No alias Ethylene-responsive transcription factor ERF016... 0.05 Archaeplastida
Gb_34286 No alias transcription factor (DREB) 0.05 Archaeplastida
Gb_41445 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os01g66270.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os02g43790.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g46220.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os05g34730.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os08g36920.1 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_100577g0010 No alias transcription factor (DREB) 0.05 Archaeplastida
MA_100724g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10082062g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_103035g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_10370681g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10427743g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10431706g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10433094g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_10433310g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_10436654g0010 No alias Ethylene-responsive transcription factor ERF018... 0.04 Archaeplastida
MA_116185g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_12171g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_134453g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_16778g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_168025g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_179692g0020 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_184464g0010 No alias transcription factor (ERF) 0.05 Archaeplastida
MA_18454g0020 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_203191g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_214532g0010 No alias transcription factor (DREB) 0.05 Archaeplastida
MA_269802g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_288689g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_329325g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_367366g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_4032g0010 No alias transcription factor (ERF) 0.06 Archaeplastida
MA_40338g0010 No alias Ethylene-responsive transcription factor ERF012... 0.02 Archaeplastida
MA_420358g0010 No alias Ethylene-responsive transcription factor 1A... 0.04 Archaeplastida
MA_42369g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_45733g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_463250g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_5280013g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_5306433g0010 No alias Ethylene-responsive transcription factor ERF017... 0.04 Archaeplastida
MA_55226g0020 No alias Ethylene-responsive transcription factor ERF016... 0.05 Archaeplastida
MA_5730259g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_65985g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_71018g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7166g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_7168929g0010 No alias Ethylene-responsive transcription factor ERF016... 0.04 Archaeplastida
MA_81029g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_81979g0010 No alias transcription factor (DREB) 0.08 Archaeplastida
MA_891091g0010 No alias Ethylene-responsive transcription factor 1A... 0.02 Archaeplastida
MA_8984558g0010 No alias transcription factor (DREB) 0.06 Archaeplastida
MA_914123g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_922309g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_928517g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9304g0020 No alias transcription factor (ERF) 0.07 Archaeplastida
MA_9565555g0010 No alias Ethylene-responsive transcription factor ERF016... 0.03 Archaeplastida
MA_959784g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_96512g0020 No alias Ethylene-responsive transcription factor ERF071... 0.02 Archaeplastida
MA_9785986g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_9905g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
Mp1g20040.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Mp6g18650.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Mp7g09350.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Mp7g13760.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Mp7g17020.1 No alias Dehydration-responsive element-binding protein 2C... 0.02 Archaeplastida
Pp3c12_25330V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c4_2660V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c4_31920V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c7_1240V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c8_7340V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Solyc01g057080.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc01g108240.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc02g090800.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g005520.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc04g007170.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc04g054910.4.1 No alias transcription factor (DREB) 0.05 Archaeplastida
Solyc04g072900.1.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc06g068360.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc06g082590.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc07g053740.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g078180.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc08g078190.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc09g089910.1.1 No alias transcription factor (ERF). transcription factor (DREB) 0.03 Archaeplastida
Solyc09g089920.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc10g050960.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g050970.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g076380.2.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc11g006050.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc11g042560.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc12g042210.2.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e003061_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Zm00001e006604_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e006982_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007352_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e009947_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e013685_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e014659_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015312_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e019159_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e019567_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e021282_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e021579_P001 No alias Pathogenesis-related genes transcriptional activator... 0.03 Archaeplastida
Zm00001e023159_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e023816_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027351_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e028920_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e032033_P001 No alias transcription factor (ERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 63 109
No external refs found!