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  5. Gb_17284

Gb_17284


Description : carboxyltransferase subunit beta of polymeric acetyl-CoA carboxylase complex


Gene families : OG0004265 (Archaeplastida) Phylogenetic Tree(s): OG0004265_tree ,
OG_05_0003478 (LandPlants) Phylogenetic Tree(s): OG_05_0003478_tree ,
OG_06_0002787 (SeedPlants) Phylogenetic Tree(s): OG_06_0002787_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17284
Cluster HCCA: Cluster_297

Target Alias Description ECC score Gene Family Method Actions
ATCG00500 ACCD acetyl-CoA carboxylase carboxyl transferase subunit beta 0.04 Archaeplastida
Gb_06828 No alias large subunit of ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Gb_06829 No alias carboxyltransferase subunit beta of polymeric acetyl-CoA... 0.05 Archaeplastida
Gb_09759 No alias Enzyme classification.EC_6 ligases.EC_6.4 ligase forming... 0.03 Archaeplastida
Gb_15504 No alias carboxyltransferase subunit beta of polymeric acetyl-CoA... 0.04 Archaeplastida
Solyc00g020020.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc00g500065.1.1 No alias component PsaI of PS-I complex 0.06 Archaeplastida
Solyc04g039820.3.1 No alias Acetyl-coenzyme A carboxylase carboxyl transferase... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR034733 AcCoA_carboxyl 207 358
IPR000685 RuBisCO_lsu_C 100 161
No external refs found!