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Gb_17413


Description : plasma membrane intrinsic protein (PIP)


Gene families : OG0000026 (Archaeplastida) Phylogenetic Tree(s): OG0000026_tree ,
OG_05_0000534 (LandPlants) Phylogenetic Tree(s): OG_05_0000534_tree ,
OG_06_0000369 (SeedPlants) Phylogenetic Tree(s): OG_06_0000369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17413
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
AT1G01620 PIP1C, TMP-B, PIP1;3 plasma membrane intrinsic protein 1C 0.03 Archaeplastida
AT2G16850 PIP3B, PIP2;8 plasma membrane intrinsic protein 2;8 0.03 Archaeplastida
AT2G45960 PIP1B, ATHH2,... plasma membrane intrinsic protein 1B 0.03 Archaeplastida
AT3G16240 ATTIP2;1,... delta tonoplast integral protein 0.04 Archaeplastida
AT3G61430 PIP1A, PIP1;1,... plasma membrane intrinsic protein 1A 0.03 Archaeplastida
GSVIVT01016276001 No alias Solute transport.channels.MIP family.plasma membrane... 0.02 Archaeplastida
LOC_Os02g44630.1 No alias plasma membrane intrinsic protein (PIP) 0.03 Archaeplastida
LOC_Os03g64330.1 No alias plasma membrane intrinsic protein (PIP) 0.02 Archaeplastida
LOC_Os04g44570.1 No alias tonoplast intrinsic protein (TIP) 0.03 Archaeplastida
Mp8g11200.1 No alias Nodulin-26-like intrinsic protein (NIP) 0.02 Archaeplastida
Smo271415 No alias Solute transport.channels.MIP family.plasma membrane... 0.04 Archaeplastida
Solyc01g111660.4.1 No alias plasma membrane intrinsic protein (PIP) 0.05 Archaeplastida
Zm00001e039086_P002 No alias tonoplast intrinsic protein (TIP) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000425 MIP 33 260
No external refs found!